Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1521 ATGGACCTGACCACACAAACCTTAGATTCTGCTAATAACAATACTAAAACCACCCCACCAACACTAATCCACCACCCCACCACCACCACAACACCAGACCCATCAAAGTCTCTATCTTTCACCCCCGTCACGCTCAAGCGCACCACCGTTCTTGCTCCTCCACCGCCTCAACCGCAACCGCCGTCATCCATGGTGGTGGCGGTTTCCTACAAAGAATGCCTCAAAAACCACGCCGCCAGCATAGGTGGCCATGCGCTGGACGGCTGCGGCGAGTTCATGCCGTCCTCCTCCACCAACCCCTCCGATCCCCGCTCTCTAAAATGCGCCGCGTGCGGCTGCCACCGCAACTTCCACCGCCGCGAACCACAAGAAAACGACAACCTGAAAAGCCACAAAAAAAACCCCACTTTTCTAAACTGCATCTACAGTAGCACCCCATCATCAGCGCCGGCGCCACTACTCTCTCACCGAGCCATGAGCCAAAGCACCTCGCCGAGCCTGAGCTCGAGCCCGAGCCACAGCCCGAGCCCGATGTCAAGCCCATCTCCGCCGCCACTCTCGCACGTGCCACCCTACCACGCTTCCGCGCCGCACATGCTTCTAGCCCTCGGCAGTGCCTATTCTTCTGCACTACCCTCCTCCGACGAACACCACCACCACAATAAAAATCTCAACTTTTCGATGATGATGAAGAGTGACATCAACAACAACTCCTCGAAGAAGAGATACAGAACCAAGTATATAGTCTTAAGTGATTTAACTGTGAAACGTTAA 774 0.5491 MDLTTQTLDSANNNTKTTPPTLIHHPTTTTTPDPSKSLSFTPVTLKRTTVLAPPPPQPQPPSSMVVAVSYKECLKNHAASIGGHALDGCGEFMPSSSTNPSDPRSLKCAACGCHRNFHRREPQENDNLKSHKKNPTFLNCIYSSTPSSAPAPLLSHRAMSQSTSPSLSSSPSHSPSPMSSPSPPPLSHVPPYHASAPHMLLALGSAYSSALPSSDEHHHHNKNLNFSMMMKSDINNNSSKKRYRTKYIVLSDLTVKR 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1521 257 MobiDBLite consensus disorder prediction 1 40 - -
Aed10g1521 257 MobiDBLite consensus disorder prediction 151 192 - -
Aed10g1521 257 Pfam ZF-HD protein dimerisation region 68 122 IPR006456 -
Aed10g1521 257 MobiDBLite consensus disorder prediction 151 175 - -
Aed10g1521 257 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 1 248 - -
Aed10g1521 257 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 70 121 IPR006456 -
Aed10g1521 257 MobiDBLite consensus disorder prediction 176 191 - -
Aed10g1521 257 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 70 121 IPR006456 -
Aed10g1521 257 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 9-LIKE 1 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1521 Aed-Chr10 20055593 20057095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1521 66 128 ZF-HD Transcription Factor Family AT1G69600 73.016 6.93e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aed10g1521 ZF-HD_dimer 9.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1521 - - gmx:102660309 249.595