Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1516 ATGACTTCCCCACTCGTGAAGATCCAAGACGAGCAGGTCCTCACCAACGATTTTCAGGACCTTTCAATCAAAGATCTGGGTGAGAAAGGGAGTGAGCCAGATATTCACGAGGTGGGGTATGGAAGCCACGGAGGAATCTGTGCCATCTGCCTAGATAAGATAGTGCTGCAGGAGACGGCATTAGTAAAAGGTTGCGAGCATGCTTACTGTGTAACATGCATCCTTCGTTGGGCTACATACCGTGAGAAAGTTACCTGCCCTCAGTGTAAACATCCATTTGAGTTCCTCAATGTCCATCGCTCACTTGATGGCAGCATTGAAGATTACATGTTTGAGGAGAGTGTTTGCTTGCTACTTCGGGCCTCATGGTTCACACCTTTATCTGTTGAAGAACATTTGGTTCATGGAGATGCATATGAAGACCTAGAAGATTATTACCAGGAGGTTGAGGATGACGATGATGATGACATGGAAGTTTACTATGGTGGTACATCCAATCTTCGTGTCATTGGCAACCGTAGATGGGGTGACAACGGCTATGTCAGGGCCGGTCGTCAAGAAGCTCGGCCAGTCCATCGCCCGAACTTCCAGGATTCAGGAGCAAGTTCTTCATCACGCGAACCGAAGAATAAAGAGGCCGGAAAAATTATCACGGGCAGAAGGGCAAAAAGGGCACAGAAAAGGGAAGCTGCTGACAAGGCGGCTGAAGAGAGGCATCAGAAGCATTTAATAAGGTTGGGTAGGAAGTGA 750 0.4787 MTSPLVKIQDEQVLTNDFQDLSIKDLGEKGSEPDIHEVGYGSHGGICAICLDKIVLQETALVKGCEHAYCVTCILRWATYREKVTCPQCKHPFEFLNVHRSLDGSIEDYMFEESVCLLLRASWFTPLSVEEHLVHGDAYEDLEDYYQEVEDDDDDDMEVYYGGTSNLRVIGNRRWGDNGYVRAGRQEARPVHRPNFQDSGASSSSREPKNKEAGKIITGRRAKRAQKREAADKAAEERHQKHLIRLGRK 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1516 249 MobiDBLite consensus disorder prediction 208 242 - -
Aed10g1516 249 MobiDBLite consensus disorder prediction 186 249 - -
Aed10g1516 249 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 41 156 IPR013083 -
Aed10g1516 249 Pfam Ring finger domain 47 90 IPR001841 -
Aed10g1516 249 ProSiteProfiles Zinc finger RING-type profile. 47 90 IPR001841 -
Aed10g1516 249 SUPERFAMILY RING/U-box 46 96 - -
Aed10g1516 249 ProSitePatterns Zinc finger RING-type signature. 65 74 IPR017907 -
Aed10g1516 249 SMART ring_2 47 89 IPR001841 -
Aed10g1516 249 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 7 249 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1516 3 249 C3H Transcription Factor Family AT5G19430 58.203 1.23e-89 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1516 - - gmx:100777135 419.083