Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1513 ATGTCCTCTTGGGATCACAACATTGACTTAGTGGCCCAGCCTACTAGACCATCTGAGAAGATTGTCACGATCAACGTGACTCGAGGAATGGATGTTATCAAAACCATTATTGACGTTGCTCGTCGGGACGATGCCAGCCTCATTGTGCTTAATGCCTCTGGCATGATTGACAGCGTGACACTTTGCAACACAAGCCAAGGCCCCACTGCCTTCGTGTTCTATGGGCCCTTCGCCTTGCTCTCTCTCATTGGCTTCTACTTGCACAACAACCACAACATCCTTGATTCCGAGGTCACCCCTCCCTCTCAATCATCCTTTGGGATCAACCTTTCTACCTTTCATGGACGTGTCTTTAGAGGCCTGATTGGTAGTAGAGTCATTGCTGGTGACAATGTGAGTATCATGGTTTCCATCTTTAGGAACTCCAATATTAACAAAAAGATTCCTGATGCAAGAAAAGGATCAACAATGACAACAACAAGAATTATGACAATAATCCTAATGATTTCAATGGGGGTGGCAACTTGTTTGGGTTCAATATGGATGGTTGCATAG 555 0.4505 MSSWDHNIDLVAQPTRPSEKIVTINVTRGMDVIKTIIDVARRDDASLIVLNASGMIDSVTLCNTSQGPTAFVFYGPFALLSLIGFYLHNNHNILDSEVTPPSQSSFGINLSTFHGRVFRGLIGSRVIAGDNVSIMVSIFRNSNINKKIPDARKGSTMTTTRIMTIILMISMGVATCLGSIWMVA 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1513 184 SUPERFAMILY AF0104/ALDC/Ptd012-like 20 148 - -
Aed10g1513 184 Pfam Plants and Prokaryotes Conserved (PCC) domain 21 140 IPR005175 -
Aed10g1513 184 Gene3D - 20 161 - -
Aed10g1513 184 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 11 150 - -
Aed10g1513 184 ProSiteProfiles PPC domain profile profile. 15 161 IPR005175 -
Aed10g1513 184 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 11 150 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1513 Aed-Chr10 19960325 19960879 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1513 21 139 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 31.092 5.55e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1513 - K06850 gmx:102662114 165.236