Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1512 ATGACAAACAATTCCATGGCAATCTCCTTCTCCCAAAACTCCCACTCCTTTGACTCAGACTCATCATCCTCTTGGGACAACCTCATCGGCTCCTCCTCCCAATGCCTCTACTGTCCACCACGACTTACCACAAACCAACCTCCACAGAACCTACCTCTTATAACCTCACCCACCAAGAAGCCACGTGGAAGGCCCCCGGGCTCTAAGAATAAGCCCAAGATCACCTCCCTCTCAAAGTACCAACTTGTTAAGCCATCCATGAAGATCGTGATTGTTAACGTGACCCCAGGGAGCGACATCATTGAGTCCATTCTAGATGTTGCTTGTCGAGGCCACGCTAGCCTCACTATACTCAATGCATTTGGCACAATCACCAAAGTGACCCTCCTCAACTCTCTAAATGGTGTTGCCAACCTCACACTTCGTGGGCCCTTCACCTTGCTTTCCCTCAATGGCTCTTACTTATACAACAACCACTATACCCCTCCCCCTCACTCATCCTTCGGGATAAGGTTTTCCACCTCTCAAGGCCAAGTCTTTGGTGGTGTCGTTGGTGGCAAAGTCATTGCCGATGATGACATCAGCCTCACAATCTCCACCTTCAGGAACTCTGGGATGTACAAGTATGTCCCTAGAAACAACGATGGAGACTAA 654 0.4939 MTNNSMAISFSQNSHSFDSDSSSSWDNLIGSSSQCLYCPPRLTTNQPPQNLPLITSPTKKPRGRPPGSKNKPKITSLSKYQLVKPSMKIVIVNVTPGSDIIESILDVACRGHASLTILNAFGTITKVTLLNSLNGVANLTLRGPFTLLSLNGSYLYNNHYTPPPHSSFGIRFSTSQGQVFGGVVGGKVIADDDISLTISTFRNSGMYKYVPRNNDGD 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1512 217 SUPERFAMILY AF0104/ALDC/Ptd012-like 86 204 - -
Aed10g1512 217 Pfam Plants and Prokaryotes Conserved (PCC) domain 89 202 IPR005175 -
Aed10g1512 217 ProSiteProfiles PPC domain profile profile. 84 217 IPR005175 -
Aed10g1512 217 CDD DUF296 91 158 IPR005175 -
Aed10g1512 217 Gene3D - 86 212 - -
Aed10g1512 217 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 11 210 IPR014476 GO:0003680
Aed10g1512 217 MobiDBLite consensus disorder prediction 41 56 - -
Aed10g1512 217 MobiDBLite consensus disorder prediction 1 23 - -
Aed10g1512 217 MobiDBLite consensus disorder prediction 41 74 - -
Aed10g1512 217 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 11 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1512 Aed-Chr10 19941574 19942227 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1512 59 208 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 30.625 2.25e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1512 - - gmx:100818645 275.789