Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1511 ATGGCATCCTCTTGGGACCAGCACACTGGCTCCTCCTCCCAACGTCCTTGCAATCCACCACCAGTTGTTGGTGCAAACCAACCTTATGAAAATCTCCTTCTCACAACCCAACCTGCCAAGAGGCCACGTGGCAGGCCTTTGGGCTCCAAGAACCCTATTGCCCAGCCCGTTGAGCCCTCTGTAAAGGTTGTCATCATCAACGTGAACTCAGGTAACGATGTCATGGAGTCCATTTTTGATGTTGCTCGTCGTTGTCATGTCAGCCTATCTGTCCTTGGTGCATCTGGCACAATCAAGGAAGTCACCCTTTCCTACTCGCCCAATGACGCTACCACCTTCACACTCCATGGTCCCTTCACCTTGCTCTCTCTCACTGGCTCATACTTATACAACAACCACTACACACTTTATCGTGGAGCAACCCATCCCTCTCCCTTATCCTTCGGGATCCACCTCATCACCTCTGAAGGTGATATCATTGGTGGCACCATTGGTGGCAAAGTCCTCGCTGGTGATGATGTCAGCATCAAACTCTCGGTCTTCAAGAACCCTGTGATTTGTAAGTATGTTCCTGAAGGTGATGACAATGACAATAACAATTATAACAATTAG 612 0.4918 MASSWDQHTGSSSQRPCNPPPVVGANQPYENLLLTTQPAKRPRGRPLGSKNPIAQPVEPSVKVVIINVNSGNDVMESIFDVARRCHVSLSVLGASGTIKEVTLSYSPNDATTFTLHGPFTLLSLTGSYLYNNHYTLYRGATHPSPLSFGIHLITSEGDIIGGTIGGKVLAGDDVSIKLSVFKNPVICKYVPEGDDNDNNNYNN 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1511 203 SUPERFAMILY AF0104/ALDC/Ptd012-like 61 186 - -
Aed10g1511 203 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 10 199 IPR014476 GO:0003680
Aed10g1511 203 Gene3D - 60 187 - -
Aed10g1511 203 MobiDBLite consensus disorder prediction 1 20 - -
Aed10g1511 203 CDD DUF296 62 132 IPR005175 -
Aed10g1511 203 Pfam Plants and Prokaryotes Conserved (PCC) domain 63 182 IPR005175 -
Aed10g1511 203 ProSiteProfiles PPC domain profile profile. 57 203 IPR005175 -
Aed10g1511 203 MobiDBLite consensus disorder prediction 1 28 - -
Aed10g1511 203 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 10 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1511 Aed-Chr10 19932224 19932835 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1511 40 184 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 36.364 6.72e-19 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1511 - - gmx:100818645 239.965