Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1509 ATGAAGCTCAACTTCATCAATGTGACCCCGGGGAGTGACATCATCGAGTCTATTCTCAACATTGCTCGTCAAGGCCACGTCAACCTCACTATCCTCAGTGCCTCTGGCATAGTCACGGGAGTGACCCTCTGTAACTCTCCTAAGGGAACTGCTGCCCTCACGCTCCAAGGGCCCTTCACTTTGCTCGCCCTCAACGGGTCTTACTTATACAACAACTACTACACCATTTATCCAGGAGCCACCTCTCCACCTCCTGTATCCTTTGCGATTAGCCTTTCTACCTCTAAAGGAAAGGTCATTGGTGGTGTCATTGATGGTAAAGTTATTGCCGGTGATAACGTCGCCCTCACAATCTATACCTTTAAGAACCCTGAGATTTACAAGCACGTTCCTAGACACAAAAAAAGGGAAAGGGACAACGATAACAACACAAATAATGACAATAACCCTAGTGATTTTAATGGGGGTGACGAGTTGTCGGGGTTCAACGTTTGTGTCATTGGATCAAATAAGAGGGTGTCTGTTTACAAATTTGCTGAATTGCTGAGATTTGAGTTCATGGAAATTCGAAGACCTTCTATGACGGTGCATGAAGAGAAACTAAAAAGAAAAAAATCGAAGCCACGGTTGCATCATGTCTCCTCGAAGTGGATAATGGTGGCTAGGGTTTACATATATGATTGGATTGAGCGTCTAAGAGAGGAAAGGATGTTAAGACATTCCAACTATATTGACACCCTAAACAAAACTACCCCACTTAGTTGA 765 0.4418 MKLNFINVTPGSDIIESILNIARQGHVNLTILSASGIVTGVTLCNSPKGTAALTLQGPFTLLALNGSYLYNNYYTIYPGATSPPPVSFAISLSTSKGKVIGGVIDGKVIAGDNVALTIYTFKNPEIYKHVPRHKKRERDNDNNTNNDNNPSDFNGGDELSGFNVCVIGSNKRVSVYKFAELLRFEFMEIRRPSMTVHEEKLKRKKSKPRLHHVSSKWIMVARVYIYDWIERLREERMLRHSNYIDTLNKTTPLS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1509 254 Gene3D - 2 144 - -
Aed10g1509 254 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 161 - -
Aed10g1509 254 SUPERFAMILY AF0104/ALDC/Ptd012-like 4 128 - -
Aed10g1509 254 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 161 IPR014476 GO:0003680
Aed10g1509 254 ProSiteProfiles PPC domain profile profile. 1 147 IPR005175 -
Aed10g1509 254 Pfam Plants and Prokaryotes Conserved (PCC) domain 5 122 IPR005175 -
Aed10g1509 254 CDD DUF296 6 111 IPR005175 -
Aed10g1509 254 MobiDBLite consensus disorder prediction 130 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1509 Aed-Chr10 19923570 19926154 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1509 1 176 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 29.444 5.47e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1509 - - gmx:100818645 204.527