Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1507 ATGAAGGTTGTCATCATCAATGTGGACCCGGGTAAGGACATAATGGAGTCCATTCTTAATGTTGCTCTTCAAGGCCATGTCTGCATCACTATCCTTAACACCTCTGGTATAGTCACTAAAGTAACCCTTCGTAACTTGACCCATGGCAATGCCACTCAAACACTCCATGGACCCTTTACCTTGCTCTCCCTTAATGGCTCATACTTATGCAACAACCATTGCAATCTTGACCCTAAATCCACCACTCCCCCTCCTTTATCCTTTAGGACCCACCTCGCCACCTCTCAAGGGAAAGTCTTCGGTGGTGTCATTGATGGTAAAGTCATTGCTGGTGACAACGTCAAACTCACAATCACTACCTTCACGAACCCTGAGATTTACAATAACATTCCTTAA 396 0.4495 MKVVIINVDPGKDIMESILNVALQGHVCITILNTSGIVTKVTLRNLTHGNATQTLHGPFTLLSLNGSYLCNNHCNLDPKSTTPPPLSFRTHLATSQGKVFGGVIDGKVIAGDNVKLTITTFTNPEIYNNIP 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1507 131 Pfam Plants and Prokaryotes Conserved (PCC) domain 3 123 IPR005175 -
Aed10g1507 131 SUPERFAMILY AF0104/ALDC/Ptd012-like 1 125 - -
Aed10g1507 131 CDD DUF296 2 121 IPR005175 -
Aed10g1507 131 ProSiteProfiles PPC domain profile profile. 1 131 IPR005175 -
Aed10g1507 131 Gene3D - 1 130 - -
Aed10g1507 131 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 128 - -
Aed10g1507 131 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 128 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1507 Aed-Chr10 19890094 19892358 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1507 1 131 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 31.852 1.53e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1507 - - gmx:102670527 180.644