Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1505 ATGGCAACATGCTTGAATCCACCTAGGCTATCCAACACTGAAGATGACTCAGTGATACTCTTTTCAACTTCAAATAATTCTCCCGAAGAGTCCAATAGTCCTTATTCTTCTTCCTCTTTCCACCATTCACCACCACCAATATCACTACATCAATTCAAAACTGCACACAAACTTTCTGTGAGAAACCTCTCCTACACTTTACACCCTCATAACAAGACCACTCCCTTCTCATTCTTCCACCTCACTCAAAAACCAAACCCTCTTAACATACTCAAATCAGTCTCCTTTGTTGCCAAAACCTCTGAGATCGTCGCCATCGTTGGCCCTAGTGGCACAGGCAAGTCCACCCTTCTGCGAATCATTGCCGGGAGGGTGAAAGACGAACAATTCGATCCAAAAAGTGTCTCAATCAATGATCATCCTATGACTAGTCCATCTCAGTTGAGGAAGATATGTGGCTTTGTGACACAAGAGGACAATTTGCTTCCAATGCTAACTGTGAAAGAAACTTTGCTGTTTAGTGCCAAGTTTAGGCTAAAGGAAATGACACCAAAAGATAGAGAAATGAGAGTAGAAACCTTGTTGCAAGAGCTAGGCCTTTTTCATGTTGCTGATAGTTTTGTTGGTGATGAAGAGAATAGAGGGATATCAGGTGGAGAGAGGAAAAGGGTTTCAATTGGAGTTGACATGATTCACAATCCTCCAATTTTGCTTTTGGATGAACCAACTTCAGGTCTAGACAGCACTTCAGCATTGCAAGTCATGGAGCTTCTCTCATCAATTGCTAAAGAAAAGCAAAGAACAGTGGTTCTTTCAATCCACCAACCAAGTTACAGAATATTGCAATATATTTCAAAGTTCTTGATCCTTTCTCATGGCTCAGTTGTTCACAATGGTAGCCTAGAACAGCTAGAGGAAACCATAACTAAATTGGGATTTCAAATTCCAACACAGCTCAATGCTCTAGAGTTCTCCATGGAAATTATATGCCGGTTTGAAGATTCCAGTTCCAAACATGATGACACTTACACCATTGAGGAGAATGAGCCATTTCCAAATTGTGAAGTCCAATCACAATGTAAGAAAGAAAGTTTTGGCACGCTTTGCTATGAAAACTTGATAGAGATACTGTTTCTCTGCTCAAGGTTTTGGAAGATCATCTATAGAACAAAGCAGCTTTTCTTGGCAAGAACAATGCAAGCACTAGTTGGTGGATTTGGGCTGGGAAGTGTTTACATAAAGACAAGAAAGGATGAAGAAGGTGTTGCTGAAAGGTTAGGCCTATTTGCATTTAGTCTTAGTTTCCTCCTCTCTTCCACAGTTGAAGCACTTCCAATATACCTTCAAGAGAGAAATGTTCTGATGAAAGAAGCCTCAAGAGGAGCCTATAGAATCTCCTCATACATGATAGCCAACACTTTTGTTTTTCTTCCATTCTTGTTTGTGGTTTCTACACTTTTTTCTGTGCCTGTGTATTGGCTAGTAGGACTAAACCCTTCTCTTTCTGCTTTCACATTCTTCACCTTTGTGGTGTGGCTCATTGTTCTCATGGCAAGTTCCTTGGTACTTTTCTTAAGTGCTGTTTCTCCTGATTTCATCTCAGGGAACTCTCTGATCTCCACAGTTCTTGGAGCATTCTTTCTCTTCTCTGGTTACTTCATACCAAAGGAGAGTATCCCAAAGTATTGGATTTTCATGTACTATGTGTCACTCTATAGGTACCCTTTGGATGCACTCCTCACAAATGAGTATTGGAGTGTTGGAAATGAGTGTTTTTCATCACATCGAATAGAGGGCTCATCAGAGTGTTTGATCACTGGGTTTGATGTGTTGAAGAGTAGAGGGCTTGAGAGGGATGGCAGGTGGATGAATGTGGGGATAATGGTTGGATTCTTTGTGGTGTACCGTGTGCTTTGTTGGATCATACTTGCACGAAAGGCCTCCAAGACTACAATATAA 1959 0.4104 MATCLNPPRLSNTEDDSVILFSTSNNSPEESNSPYSSSSFHHSPPPISLHQFKTAHKLSVRNLSYTLHPHNKTTPFSFFHLTQKPNPLNILKSVSFVAKTSEIVAIVGPSGTGKSTLLRIIAGRVKDEQFDPKSVSINDHPMTSPSQLRKICGFVTQEDNLLPMLTVKETLLFSAKFRLKEMTPKDREMRVETLLQELGLFHVADSFVGDEENRGISGGERKRVSIGVDMIHNPPILLLDEPTSGLDSTSALQVMELLSSIAKEKQRTVVLSIHQPSYRILQYISKFLILSHGSVVHNGSLEQLEETITKLGFQIPTQLNALEFSMEIICRFEDSSSKHDDTYTIEENEPFPNCEVQSQCKKESFGTLCYENLIEILFLCSRFWKIIYRTKQLFLARTMQALVGGFGLGSVYIKTRKDEEGVAERLGLFAFSLSFLLSSTVEALPIYLQERNVLMKEASRGAYRISSYMIANTFVFLPFLFVVSTLFSVPVYWLVGLNPSLSAFTFFTFVVWLIVLMASSLVLFLSAVSPDFISGNSLISTVLGAFFLFSGYFIPKESIPKYWIFMYYVSLYRYPLDALLTNEYWSVGNECFSSHRIEGSSECLITGFDVLKSRGLERDGRWMNVGIMVGFFVVYRVLCWIILARKASKTTI 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1505 652 Pfam ABC-2 type transporter 376 584 IPR013525 GO:0016020|GO:0140359
Aed10g1505 652 PANTHER ABC TRANSPORTER G FAMILY MEMBER 23 3 645 - -
Aed10g1505 652 Pfam ABC transporter 91 244 IPR003439 GO:0005524
Aed10g1505 652 Gene3D - 57 343 IPR027417 -
Aed10g1505 652 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 309 IPR027417 -
Aed10g1505 652 SMART AAA_5 100 302 IPR003593 -
Aed10g1505 652 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 645 - -
Aed10g1505 652 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 58 317 IPR003439 GO:0005524
Aed10g1505 652 Pfam ABC-2 type transporter 274 337 IPR043926 GO:0140359
Aed10g1505 652 ProSitePatterns ABC transporters family signature. 216 230 IPR017871 GO:0005524
Aed10g1505 652 MobiDBLite consensus disorder prediction 15 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1505 Aed-Chr10 19856175 19858133 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1505 79 304 Calmodulin-binding Proteins AT2G36910 28.390 6.36e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1505 K05681 - gmx:100783883 1070.07