Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed10g1493 | ATGGGCATCTGTTGCTCCCAGAGCAACACTGCCGACGGCCCGGCTGATGATGCCGCCACCAATGACAAGGGAGAAAACAACCGAAGCAGCAGTGCAAACAAAAACAACGACGCTTACAACTCACCGTCAAAGCCACCACCCACCGTGGTCCTGCCGAACTCCAAACCAGCCGCGAAGCCAGGCCCGATAGGCCCAGTCCTTGGCCGGCCGATGGAGGACGTCAGGGCCACGTACACCATAGGGAAGGAGCTAGGGCGGGGTCAGTTTGGTGTCACGTATCTGTGCACCGACAAATCCACGGGCGAGCAGTTTGCATGCAAAACCATTGCCAAGAGGAAGCTTGTGAACAAGGAGGACATAGAGGACGTGAGAAGAGAGGTGCAAATCATGTACCATCTCTCTGGCCAACCCAACATCGTGGAGCTTAAGGGTGCTTATGAGGACAAACAATCGGTGCATTTGGTCATGGAGCTTTGTGCCGGTGGTGAACTCTTTGATCGTATCATTGCCAAAGGACACTACACTGAACGCGCCGCCGCGTCGTTGTTGAGAACCATCATGCAAATCATTCACACCTTCCATTCCATGGGTGTCATTCATAGAGATCTTAAGCCCGAGAATTTCCTCATGTTGAATAAGGAAGAGAATGCACCCGTCAAGGCCACGGATTTTGGTCTATCCGTTTTTTTCAAAGAAGGTATTTGTTCTGGGCTTACCAGACTAAAGACTAACTCTGATAGTAATATTATAACTATCGTCAGTCTAAAGAAGGTTCTTACACAACATACAGGATCGAACACAGAATTTTTAACTAAACATTTTAATCATTTTTCTTTGCATTAA | 843 | 0.4864 | MGICCSQSNTADGPADDAATNDKGENNRSSSANKNNDAYNSPSKPPPTVVLPNSKPAAKPGPIGPVLGRPMEDVRATYTIGKELGRGQFGVTYLCTDKSTGEQFACKTIAKRKLVNKEDIEDVRREVQIMYHLSGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIMQIIHTFHSMGVIHRDLKPENFLMLNKEENAPVKATDFGLSVFFKEGICSGLTRLKTNSDSNIITIVSLKKVLTQHTGSNTEFLTKHFNHFSLH | 280 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed10g1493 | 280 | SUPERFAMILY | Protein kinase-like (PK-like) | 77 | 234 | IPR011009 | - | |
Aed10g1493 | 280 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Aed10g1493 | 280 | Gene3D | Transferase(Phosphotransferase) domain 1 | 164 | 266 | - | - | |
Aed10g1493 | 280 | PANTHER | CALMODULIN-DOMAIN KINASE CDPK PROTEIN | 23 | 233 | - | - | |
Aed10g1493 | 280 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 198 | 210 | IPR008271 | GO:0004672|GO:0006468 | |
Aed10g1493 | 280 | Pfam | Protein kinase domain | 78 | 233 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed10g1493 | 280 | MobiDBLite | consensus disorder prediction | 1 | 68 | - | - | |
Aed10g1493 | 280 | ProSiteProfiles | Protein kinase domain profile. | 78 | 280 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed10g1493 | 280 | Gene3D | Phosphorylase Kinase; domain 1 | 79 | 163 | - | - | |
Aed10g1493 | 280 | MobiDBLite | consensus disorder prediction | 24 | 43 | - | - | |
Aed10g1493 | 280 | SMART | serkin_6 | 78 | 275 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed10g1493 | 280 | ProSitePatterns | Protein kinases ATP-binding region signature. | 84 | 111 | IPR017441 | GO:0005524 | |
Aed10g1493 | 280 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 23 | 233 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed10g1493 | Aed-Chr10 | 19649870 | 19654560 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed10g1493 | 1 | 233 | EF-hand Containing Proteins | AT5G12180 | 73.504 | 2.26e-118 | 348 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Aed10g1493 | Pkinase | 1.9e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed10g1493 | K13412 | - | gmx:100781355 | 399.823 |