Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1493 ATGGGCATCTGTTGCTCCCAGAGCAACACTGCCGACGGCCCGGCTGATGATGCCGCCACCAATGACAAGGGAGAAAACAACCGAAGCAGCAGTGCAAACAAAAACAACGACGCTTACAACTCACCGTCAAAGCCACCACCCACCGTGGTCCTGCCGAACTCCAAACCAGCCGCGAAGCCAGGCCCGATAGGCCCAGTCCTTGGCCGGCCGATGGAGGACGTCAGGGCCACGTACACCATAGGGAAGGAGCTAGGGCGGGGTCAGTTTGGTGTCACGTATCTGTGCACCGACAAATCCACGGGCGAGCAGTTTGCATGCAAAACCATTGCCAAGAGGAAGCTTGTGAACAAGGAGGACATAGAGGACGTGAGAAGAGAGGTGCAAATCATGTACCATCTCTCTGGCCAACCCAACATCGTGGAGCTTAAGGGTGCTTATGAGGACAAACAATCGGTGCATTTGGTCATGGAGCTTTGTGCCGGTGGTGAACTCTTTGATCGTATCATTGCCAAAGGACACTACACTGAACGCGCCGCCGCGTCGTTGTTGAGAACCATCATGCAAATCATTCACACCTTCCATTCCATGGGTGTCATTCATAGAGATCTTAAGCCCGAGAATTTCCTCATGTTGAATAAGGAAGAGAATGCACCCGTCAAGGCCACGGATTTTGGTCTATCCGTTTTTTTCAAAGAAGGTATTTGTTCTGGGCTTACCAGACTAAAGACTAACTCTGATAGTAATATTATAACTATCGTCAGTCTAAAGAAGGTTCTTACACAACATACAGGATCGAACACAGAATTTTTAACTAAACATTTTAATCATTTTTCTTTGCATTAA 843 0.4864 MGICCSQSNTADGPADDAATNDKGENNRSSSANKNNDAYNSPSKPPPTVVLPNSKPAAKPGPIGPVLGRPMEDVRATYTIGKELGRGQFGVTYLCTDKSTGEQFACKTIAKRKLVNKEDIEDVRREVQIMYHLSGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIMQIIHTFHSMGVIHRDLKPENFLMLNKEENAPVKATDFGLSVFFKEGICSGLTRLKTNSDSNIITIVSLKKVLTQHTGSNTEFLTKHFNHFSLH 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1493 280 SUPERFAMILY Protein kinase-like (PK-like) 77 234 IPR011009 -
Aed10g1493 280 MobiDBLite consensus disorder prediction 1 15 - -
Aed10g1493 280 Gene3D Transferase(Phosphotransferase) domain 1 164 266 - -
Aed10g1493 280 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 23 233 - -
Aed10g1493 280 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Aed10g1493 280 Pfam Protein kinase domain 78 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1493 280 MobiDBLite consensus disorder prediction 1 68 - -
Aed10g1493 280 ProSiteProfiles Protein kinase domain profile. 78 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1493 280 Gene3D Phosphorylase Kinase; domain 1 79 163 - -
Aed10g1493 280 MobiDBLite consensus disorder prediction 24 43 - -
Aed10g1493 280 SMART serkin_6 78 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1493 280 ProSitePatterns Protein kinases ATP-binding region signature. 84 111 IPR017441 GO:0005524
Aed10g1493 280 PANTHER SERINE/THREONINE-PROTEIN KINASE 23 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1493 Aed-Chr10 19649870 19654560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1493 1 233 EF-hand Containing Proteins AT5G12180 73.504 2.26e-118 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aed10g1493 Pkinase 1.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1493 K13412 - gmx:100781355 399.823