Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1489 ATGGCTTTCACACTAGACAGTAGTAGTAGTAGAAGTAGGTGGGAGTTTGCAAATGAGCACTTCAGAAAAGGATCAAAGCACCTTTTATGTGAAATTCACAGAAGAAAAGCACCTCAGCAGCATCACCGACTCTTCAATCATGATCAACCACCATCCCAGAATCTTCAGCAAGATGAAAGTCTCTTCTGGCTTGACACAACTCCACTTCCAATATCATCTCCGAACCCAAACAACACCACAGACAATATTCTAACAGCACTTTCAGAAGACAACCAAAGGCTAAGGAGGAAGAACTTCATGCTCTTGTCAGAACTCAGCCACATGAAGACTTTGTACAGTGACATCATATACTTCATCCAAAACCATGTGAAACCAGCAGCAGCACCATTATTTGACCAAAGAAGTTGTATTGTGGATAAGTCTTTATTGATTACTTCTACTCATGAGGAATCAAACGGTTCATCTGTGAAGCTATTTGGGTTTTCATTGAAAGAATAA 498 0.4016 MAFTLDSSSSRSRWEFANEHFRKGSKHLLCEIHRRKAPQQHHRLFNHDQPPSQNLQQDESLFWLDTTPLPISSPNPNNTTDNILTALSEDNQRLRRKNFMLLSELSHMKTLYSDIIYFIQNHVKPAAAPLFDQRSCIVDKSLLITSTHEESNGSSVKLFGFSLKE 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1489 165 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 12 129 IPR027725 -
Aed10g1489 165 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-4D 12 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1489 Aed-Chr10 19609428 19612155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1489 13 127 HSF AT1G46264 49.265 1.22e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1489 K09419 - gmx:100806150 202.216