Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1486 ATGTTCCGAATATATGTGACACAGACTTGCTCAGGCCAAGTCTATTCGCTACAAGTTTCTCGGTGGCCTCGCTGTTTGCGGGTTAGGCGTGTACCTAGTCTTGAGAAGTTGATATGTGCTTGCTATGGTATTTTAAGATTTGTGATGGAAAGTGGTGCCAAGGGCTGCGAGTGGAAAATTGAGGGCTTAGAGAGCAAAATCCATGAAATTCAAGGATGGTACATGATCTCTTCTGGACAACCAGTCAAGGATTACATTGACTCTGCACTGAGACATGTCCTCCTAAGACAGGGTGTTTTCGGTATCAAGTTTAAGATTATGCTTGATTGGGATCCTAAAGGGAAACAAGGTCCTAAAACTCCTCTGCCTGATCTTGACACAATCCTGCTGGTGTTGCTTTTTATGTTGTGTTGTATGGTGTAA 423 0.435 MFRIYVTQTCSGQVYSLQVSRWPRCLRVRRVPSLEKLICACYGILRFVMESGAKGCEWKIEGLESKIHEIQGWYMISSGQPVKDYIDSALRHVLLRQGVFGIKFKIMLDWDPKGKQGPKTPLPDLDTILLVLLFMLCCMV 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1486 140 Gene3D - 28 130 IPR036419 -
Aed10g1486 140 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 39 128 - -
Aed10g1486 140 SUPERFAMILY Ribosomal protein S3 C-terminal domain 39 109 IPR036419 -
Aed10g1486 140 PANTHER 40S RIBOSOMAL PROTEIN S3-RELATED 39 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1486 Aed-Chr10 19553087 19554360 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1486 40 125 Cytoplasmic Ribosomal Protein Gene Family AT5G35530 67.778 1.61e-40 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1486 K02985 - gmx:100499737 127.872