Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1483 ATGAAGACTTTCATAGTGCAACCTTCATCCATCTCAAAACCCACCCACATGTTTCCCACCTATAACAACATTATTCTTCATATTCCTCACATGATTTTCTCTCTCCCAAAACTACCTTCCCTTGTCGTTCACTACCACCTTTGTTTCATAAGAAAACCTGGCACTAAGAACAAGCCAAAGCCATCCCATGTGACTAGCCAATTCATAAAACCCATTTACATTGAAGTCCCTGATAACTTTGATGTGATTAAGGCAATTCTCCAATTTACTCGCTGCCACAAAGATATCAACATCATAGTGCAAAGCGCATCAGGCACTCTTTCTAGTGTCACTCTTTATCACGCCAATTCTAATGCTTCTGCTTTCACTCTCTATGGACCCTTCTCATTAATTTCCCTCACTGGCACCTACACAAATAACACCGCTTTCTCTGGTTCTTCATCATTGTCTTCATTTAATCACAACCCTTATTGTTTTAGGATTTCCTTCTCTATGATTTCAGGTCAAAGCATTATTGGAGTTGTTGGAGGAAAGGTTGTGGCAGAGAATGGGGTTATTGTGGTGGCTACTATTTTCAACAACCCTGAGGTTCTCAAGGGTAGGATCAATAAAATTAGTGAAGAATGGAATGATGATGATAACAATAACCCTAATAAATATGATCAAGATCAACAAAAAAATGCATTTTTGGAGAAAATGGCACATTGTCAAGCATATCTTACTCACATTAGCGGTCATGCTAGTAAAGCTCATGGCTGTTTAGGGCCAATAATGGCTGTCTTTTGGGAGGTTACTCACTTCATTTGGGTAGAAGCCTTTGCATCATCTATGTTGGTTGAAGGTAGAAGCAAATCGCTGAGATTTAAGAAACTCTACGAGGTTTGCCATGCCAACAACGATAGCAGGGTCTGCGGTTACATCGACAATAAGGGATTGAAGTTTGCTTTGTGTCTTGGGTCTATGCTATTTTTGACTAGCAATAATGGAAACAAGGTTTTGATTACATTTCAAAATCTAATACTATCAGTAACAGTAACAGGTTCCATCCGAGATGCACCATTCCTATCCCTTGCACCGTCCTCTAGCAATCATCTCCCTTGTGCCGTTGTCTTTCTCGCGTTGTCGTCTCCCTTGCGTTGTCATCTACTGCATGCCGTCATTCTTGCACCGTCATCTCCCTGGCGCCATTGTCTACTCAGCCGCCCTGTTGACTCTTCTTCACGCGTCTTCTTCCCTCCCACCACCGTTGACGAGCATTGCCAGCCTCACCGCAGTAGAGTCTCCTCACCACTTCAGCCACCCTCGCGACCTCCTTTGCTGGCGGCATGCTTGCTTACCTTCTCTCAGCGGCAACCTCCATCCCAACAGAGAAGGAAGTGGCTAGGTTGGAGACGACTTAATGAGTTTGAGGCTGCAAAATCTGATATTCCAAGTTGGCATTCTACACTTAAAAATGAGTCTTCCATGCCTGCTGGGATCATTCAAATAGTGATCATGGTGAATGCTGAAAAGAAACACATGCAAGTCGTGCTAATGCAGTAA 1542 0.43 MKTFIVQPSSISKPTHMFPTYNNIILHIPHMIFSLPKLPSLVVHYHLCFIRKPGTKNKPKPSHVTSQFIKPIYIEVPDNFDVIKAILQFTRCHKDINIIVQSASGTLSSVTLYHANSNASAFTLYGPFSLISLTGTYTNNTAFSGSSSLSSFNHNPYCFRISFSMISGQSIIGVVGGKVVAENGVIVVATIFNNPEVLKGRINKISEEWNDDDNNNPNKYDQDQQKNAFLEKMAHCQAYLTHISGHASKAHGCLGPIMAVFWEVTHFIWVEAFASSMLVEGRSKSLRFKKLYEVCHANNDSRVCGYIDNKGLKFALCLGSMLFLTSNNGNKVLITFQNLILSVTVTGSIRDAPFLSLAPSSSNHLPCAVVFLALSSPLRCHLLHAVILAPSSPWRHCLLSRPVDSSSRVFFPPTTVDEHCQPHRSRVSSPLQPPSRPPLLAACLLTFSQRQPPSQQRRKWLGWRRLNEFEAAKSDIPSWHSTLKNESSMPAGIIQIVIMVNAEKKHMQVVLMQ 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1483 513 CDD DUF296 70 191 IPR005175 -
Aed10g1483 513 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 51 239 - -
Aed10g1483 513 Gene3D - 69 203 - -
Aed10g1483 513 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 51 239 IPR014476 GO:0003680
Aed10g1483 513 Pfam Plants and Prokaryotes Conserved (PCC) domain 70 193 IPR005175 -
Aed10g1483 513 ProSiteProfiles PPC domain profile profile. 65 212 IPR005175 -
Aed10g1483 513 SUPERFAMILY AF0104/ALDC/Ptd012-like 69 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1483 Aed-Chr10 19431277 19442849 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1483 51 195 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 36.184 2.44e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1483 - - gmx:100790942 168.318