Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1481 ATGGTTGATCCGTCTGATGAACACACTGGCCATGAATCTTCACTAACAAAGAGAAAACCTGGCACTAAGAAGAAGCCAAAGCCATCCCATGTGACTAGCCAATTCATAAAACCCATTTACATTGAAGTCCCTGATAACTTTGATGTGATTAAGGCAATTCTCCAATTTACTCGCTGCCACAAAGTGATCAACATCATAGTGCAAAGCGCATCAGGCACTCTTTCTAGTGTCACTCTTTATCACGCCAATTCTAATGCTTCTGCTTTCACTCTCTATGGACCCTTCTCATTAATTTCCCTCACTGGCACCTACACAAATAACACTGCTTTCTCTGGTTCTTCATCATCATCATTATTTAATCACAACCCTTATTGTTTTAGGATTTCCTTCTCTACGATTTCAGGTCAAAGCATTATTGGAGTTGTTGGAGGAAAGGTTGTGGCAGAGAATGGGGTTATCGTGGTGGCTACTATTTTCAACAACCCTGAGGTTCTCAAGGGTAGGATCAATAACAATAGTGAAGAATGGAATGATGATGATAACAATAACCCTAATAAATATGATCAAGGTTGCAATCAGAACATGTCTAGGTTAAATGTTGCTACCTCATACCCAGAGATGTGA 624 0.399 MVDPSDEHTGHESSLTKRKPGTKKKPKPSHVTSQFIKPIYIEVPDNFDVIKAILQFTRCHKVINIIVQSASGTLSSVTLYHANSNASAFTLYGPFSLISLTGTYTNNTAFSGSSSSSLFNHNPYCFRISFSTISGQSIIGVVGGKVVAENGVIVVATIFNNPEVLKGRINNNSEEWNDDDNNNPNKYDQGCNQNMSRLNVATSYPEM 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1481 207 MobiDBLite consensus disorder prediction 1 19 - -
Aed10g1481 207 MobiDBLite consensus disorder prediction 1 30 - -
Aed10g1481 207 MobiDBLite consensus disorder prediction 170 192 - -
Aed10g1481 207 CDD DUF296 37 158 IPR005175 -
Aed10g1481 207 Pfam Plants and Prokaryotes Conserved (PCC) domain 37 160 IPR005175 -
Aed10g1481 207 SUPERFAMILY AF0104/ALDC/Ptd012-like 36 163 - -
Aed10g1481 207 Gene3D - 36 170 - -
Aed10g1481 207 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 185 - -
Aed10g1481 207 ProSiteProfiles PPC domain profile profile. 32 179 IPR005175 -
Aed10g1481 207 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 18 185 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1481 Aed-Chr10 19399114 19399737 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1481 18 162 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 35.762 1.08e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1481 - - gmx:100790942 167.933