Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1479 ATGGTTAAGGTTTGGAAGTCATGGTGTGTTTTGGTTTCTGCTATGCATTTGTTTCACATAACAACTTCAGATTTCATCGTCAAGAATCTACCAGGTTTTGGGGATCTTCCGTTCACAATGAATACTGGGTCAGTTATAACCTCCTCGAGTCCCTTGAATGACCCACTTCTTCTTTGGCTTGTTGGAGGTGCAGGGCCATTAATGTTTAACTATGACGATTTTAATGGCAGTTTACCACAGCTTCTGTTGAATCCATACACTTGGACAAAGGTACTTAACATATTATATGTGGATGCCCCTGTTGGTACTGGATATTCTTACTCAAAAACACAAGAAGGCTACTATAGCAATGACAAGCAATTGGTCGAACACATGTATGATTTTTTCCAAAAGTGGCTGGTGGATCACCCAGAATTCAGATCGAATCCACTTTACATTGGTGGTGGTTCTTATTCAGGCGTAACTGTTCTTCCCCTTGTTCATAAACTATATGAAGATTATAAAGCAGAACGCTCACCAATCCTGAACATCCAAGGCTTTGTGCTTGCAAGTGCAAGACTTGACTATTTCTTGGACAATAACGCAAAAGTTGAATTTGCTCACAAACGTACACTTATATCAGATGAATTGTACGAGTCAATTAAATTTAATTGCAATGGTGATTATGTTAATCTTGATCCCAACAACACAAAATGTATGTCAGATTATGCAGCCTACACTGAGTTAGTTCGTTACATAAATGAGTATCAAATTTTGGAACCAAGTTGTAAGATGGCATCTAAGGATAATCAAAGAATTCTTTCTCAAGAGATGACCTATATGCAATTGGAGAATTATGGGCAAATGATCCACATGTTCGAAAGGCACTTCAAGTTAGAGAGGGAACAAAAGATAACTTCCAACGATGCAATCGCACCGATGCATACACATGGAACATTCTTAGTCACCGATATTGACATGGCGTTACCGTATCTTAGTACACATTCTATTGTGAAGTCACTTAATTTGAAATTGGATATGACTTGGCATCCATGGTTCGTTGATGGTGAAGTAGCAGGATACGCAGAGGAATACCAAAAAAGTGAGCATCGCCTAACGTACGTCATTGTGAAGGGAGCACGACATGTGGCGCAAGAGGACAAACCTAAGGAAGCATTCGAGATGATTGATCGATGGTTGTCATTTTCTGATATATAA 1197 0.391 MVKVWKSWCVLVSAMHLFHITTSDFIVKNLPGFGDLPFTMNTGSVITSSSPLNDPLLLWLVGGAGPLMFNYDDFNGSLPQLLLNPYTWTKVLNILYVDAPVGTGYSYSKTQEGYYSNDKQLVEHMYDFFQKWLVDHPEFRSNPLYIGGGSYSGVTVLPLVHKLYEDYKAERSPILNIQGFVLASARLDYFLDNNAKVEFAHKRTLISDELYESIKFNCNGDYVNLDPNNTKCMSDYAAYTELVRYINEYQILEPSCKMASKDNQRILSQEMTYMQLENYGQMIHMFERHFKLEREQKITSNDAIAPMHTHGTFLVTDIDMALPYLSTHSIVKSLNLKLDMTWHPWFVDGEVAGYAEEYQKSEHRLTYVIVKGARHVAQEDKPKEAFEMIDRWLSFSDI 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1479 398 Gene3D alpha/beta hydrolase 21 268 IPR029058 -
Aed10g1479 398 Gene3D - 305 394 - -
Aed10g1479 398 PRINTS Carboxypeptidase C serine protease (S10) family signature 365 378 IPR001563 GO:0004185|GO:0006508
Aed10g1479 398 PRINTS Carboxypeptidase C serine protease (S10) family signature 97 107 IPR001563 GO:0004185|GO:0006508
Aed10g1479 398 PRINTS Carboxypeptidase C serine protease (S10) family signature 84 96 IPR001563 GO:0004185|GO:0006508
Aed10g1479 398 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 157 IPR001563 GO:0004185|GO:0006508
Aed10g1479 398 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 11 395 - -
Aed10g1479 398 SUPERFAMILY alpha/beta-Hydrolases 27 394 IPR029058 -
Aed10g1479 398 Pfam Serine carboxypeptidase 48 394 IPR001563 GO:0004185|GO:0006508
Aed10g1479 398 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 395 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1479 Aed-Chr10 19377698 19384980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1479 317 394 Calmodulin-binding Proteins AT2G22960 39.744 1.22e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1479 K16296 - gmx:100791997 522.702