Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1478 ATGGTTAAGGTTTGGAAATCATGGTGTGTTTTGGTTTCAGTTCTGCATTTGTTTCGCGTCACATCTTCGGAGTTCATCGTCAAGAATCTACCAGGTTTTGGGGATCTTCCGTTCACAATGAATACTGGATACATTGGTGTTGGAGAAAGAGAAGAGGTGCAATTATATTATTACTTTGTTGAATCTCAGAGGAGTCCCTTGAATGACCCGCTTCTACTTTGGCTTGTTGGAGGACCAGGTTGCTCTGCTCATTCTGCTTTCTTCTATGAAAATGGGCCATTAAAGTTTAACTATGACGATTTTAATGGCAGTTTACCACAGCTTCTACTGAATCCAAACACTTGGACAAAGGTTCTTAACATATTATATGTGGATGCACCTGTTGGTACTGGATATTCTTACTCAAGAACACAAGAAGGCTACTATAACAATGACAAACAATCGGTGGAACACATCTATGATTTTATCCAAAAGTGGCTGGTGAATCACTCTGAATTTCGATCGAATCCACTTTACATTGGTGGTGGTTCTTATTCGGGCATAGTTGTTCTTCCCCTTGTTCATCAAGTATATGAAGATTATAAAGCAGGACGCTCACCAATCACGAACATCCAAGGCTTTGTGCTTGCAAGTCCAAGACTTGATTCTTTCTTGGACAATAACACTAAAGTTGAATTTGCTCACAAACGCACCCTTATATCAAATGAATTATACGAGTCAATTAAATCTAATTGCAATGGTGATTATGTTAATCTTGATCCCAACAACGCAAAATGTATGTCAGATTATGCAGCCTTCACTGAGGATGACCAATATGCAATTGGAGAATTATGGGCAAATGATCCACATGTTCGAAAGGCACTTCAAGTTAGAGAGGGAACAAAAGATAACTTCCAACGATGCAATCGCACCGATGCATACACATGGAACATTCTTAGTGTCGTTGACTACCTTCATAATCTAACAAACACAAACCTGCGATCTCTAATTTACTGGTAA 999 0.3904 MVKVWKSWCVLVSVLHLFRVTSSEFIVKNLPGFGDLPFTMNTGYIGVGEREEVQLYYYFVESQRSPLNDPLLLWLVGGPGCSAHSAFFYENGPLKFNYDDFNGSLPQLLLNPNTWTKVLNILYVDAPVGTGYSYSRTQEGYYNNDKQSVEHIYDFIQKWLVNHSEFRSNPLYIGGGSYSGIVVLPLVHQVYEDYKAGRSPITNIQGFVLASPRLDSFLDNNTKVEFAHKRTLISNELYESIKSNCNGDYVNLDPNNAKCMSDYAAFTEDDQYAIGELWANDPHVRKALQVREGTKDNFQRCNRTDAYTWNILSVVDYLHNLTNTNLRSLIYW 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1478 332 Gene3D alpha/beta hydrolase 23 273 IPR029058 -
Aed10g1478 332 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Aed10g1478 332 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Aed10g1478 332 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Aed10g1478 332 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 269 331 - -
Aed10g1478 332 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 11 268 - -
Aed10g1478 332 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 269 331 IPR001563 GO:0004185|GO:0006508
Aed10g1478 332 Pfam Serine carboxypeptidase 35 268 IPR001563 GO:0004185|GO:0006508
Aed10g1478 332 SUPERFAMILY alpha/beta-Hydrolases 27 332 IPR029058 -
Aed10g1478 332 Gene3D - 274 332 - -
Aed10g1478 332 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 268 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1478 Aed-Chr10 19371875 19375895 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1478 273 331 Calmodulin-binding Proteins AT2G22960 42.373 1.09e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1478 K16296 - gmx:100791997 598.201