Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1477 AACAGAACAGGGGTTTACAGAGGTTCTGGGTTTTTCTTCCCATTACGAAGTACAATCCCTCTGCAGCAGAAGCATCCACATAAACTCGCCACCGCACGGGCACGATTTCGTTCGTGGTTCCTCAATTTTCAAAGAATACCAATGGCTCATAGGCGCTGCCTCTTGAGAAGAGGGAACCTCATGGATCGGAAGTGCCACCTGTCTTTCAGTTATGTTCTCCATAGCGATGAAGGGAAAGGTGAATGCCCTGATGGAAAGTCATCTTCAGCAGGCATTAGTAATTCTATCCAAAGAAGGATGTTTGGGAACTCAGTTGATGGATCAATGGGGTCCGTTGCCTATTCTGGACATAGAATGCAGTCAAACAGATTCCTTTTTCCATACTCTGGATATAATTTCTGTCGACATATGTGGGCATCCATAGTTCTAACAACTCTCTTGATTCGGAGTGCAACAGTTCCACTCTTAATAAATCAACTTAAGGCCACTTCTAAGCTTACACTAATGAGGCCGCAAATGGAAAAAATAAAGGAAGAGATTGAAGAGAAGGCTATGGATCCCATAGCTGTTGCTGAAGGTCAGAAAAAGATGAAGAAGCTTTTTAAGGAATATGGTACGAGTCCGTTTACTCCATTGAAGGGACTCTTTATTCAAGGTCCTGTCTTCATTAGTTTTTTCCTTGCGATAAGAAACATGGCTGAAAAGATGCCATCATTCAAGCATGGGGGAGCCTACTGGTTTGCTGATCTCACAACTCCAGATCCCTTGTACATTTTGCCTGTTTTGACTGCATTGTCATTCTTAATAACAGTAGAGTGCAATATGCAAGAAGGCATGGAAGGAAATCCTATGGCTGTCACCATGAAAAAATTCTCTAGGGGTCTTGCAGTCCTTACAGTTCCTTTCACTATGGGATTTCCGAAGGCTATATTTTGTTACTGGATTACATCAAATTTGTTTTCACTTGTGTATGGAATTGTCCTTAAAGTTCCTGGTGTTAAGAAAGCTTTGCGAATTCCCATAATAACCGAAGCAGCACCCACCAGTGCTCCACAATCTCCCTTTTCTTTATTTCCAGCACTAAAACAAGCTACATCAGCAACAAAGGGACCAAGCTCATTGGCTGTTGAACCATCAAAACATCCAAAGAAAAAGACATCTTCTGATGTCAATCAAAGACTTAAACGTTTAGAGAAACAAGTGAAAGGAAGAAAGAAAAACAAGAACTGA 1230 0.4154 NRTGVYRGSGFFFPLRSTIPLQQKHPHKLATARARFRSWFLNFQRIPMAHRRCLLRRGNLMDRKCHLSFSYVLHSDEGKGECPDGKSSSAGISNSIQRRMFGNSVDGSMGSVAYSGHRMQSNRFLFPYSGYNFCRHMWASIVLTTLLIRSATVPLLINQLKATSKLTLMRPQMEKIKEEIEEKAMDPIAVAEGQKKMKKLFKEYGTSPFTPLKGLFIQGPVFISFFLAIRNMAEKMPSFKHGGAYWFADLTTPDPLYILPVLTALSFLITVECNMQEGMEGNPMAVTMKKFSRGLAVLTVPFTMGFPKAIFCYWITSNLFSLVYGIVLKVPGVKKALRIPIITEAAPTSAPQSPFSLFPALKQATSATKGPSSLAVEPSKHPKKKTSSDVNQRLKRLEKQVKGRKKNKN 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1477 409 PANTHER OXA1 48 373 IPR001708 GO:0016021|GO:0032977
Aed10g1477 409 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1-RELATED 48 373 - -
Aed10g1477 409 MobiDBLite consensus disorder prediction 369 409 - -
Aed10g1477 409 Pfam 60Kd inner membrane protein 139 326 IPR001708 GO:0016021|GO:0032977
Aed10g1477 409 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 138 326 IPR028055 -
Aed10g1477 409 Coils Coil 394 409 - -
Aed10g1477 409 MobiDBLite consensus disorder prediction 378 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1477 Aed-Chr10 19361531 19369011 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1477 127 408 Chloroplast and Mitochondria Gene Families AT2G28800 22.759 1.20e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1477 K03217 - gmx:100787806 490.73