Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1461 ATGAGATACAATGAGAGGAAGGAAAAGATTGGTGAGCGAATTGTTGCTCTTCAGCAGCTTGTTTCGCCATATGGAAAGACAGATACATCTTCTGTTCTAAAGGAGGCAATGGATTACATAGGATTCCTTCATAAACAAGTTAAGCTGCTCAGTGCTCCATACCTTGAAAGTTCACCAGCACCCAAGATGCAGGGTATGGAGCCATGCAGCCCGAGGAGTAGAGGCTTATGTGTTATTCCTGTGTCATTTACAATCGGAGTTGTTGAGAGCAATGGTGCAGATATCTGGGCTCCCATTAAGACTACTACTTCACCTAAATTTGAGAAGGATGATGTCTCCCAATTTCATTGA 351 0.4302 MRYNERKEKIGERIVALQQLVSPYGKTDTSSVLKEAMDYIGFLHKQVKLLSAPYLESSPAPKMQGMEPCSPRSRGLCVIPVSFTIGVVESNGADIWAPIKTTTSPKFEKDDVSQFH 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1461 116 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 5 94 - -
Aed10g1461 116 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 43 IPR011598 GO:0046983
Aed10g1461 116 PANTHER TRANSCRIPTION FACTOR BHLH154 5 94 - -
Aed10g1461 116 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 59 IPR036638 GO:0046983
Aed10g1461 116 CDD bHLH_AtbHLH_like 4 51 IPR045239 -
Aed10g1461 116 Gene3D - 4 58 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1461 Aed-Chr10 19122329 19124479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1461 5 104 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 62.000 6.38e-43 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1461 - - gmx:100809747 206.453