Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1432 ATGGATCAGAAAGAGAAAGAAAAGCATGAGGTTTCGGATCATGGGTGGGTCGAATCTTGCAAGAAAGAGAAGATCATGATGAAGAGATCGCTTCTGGATTCTGCTTGCAAAATAGCTGAAGCTGATGAAGAATCAATGGCGGTTGAAACAACTCCTCCAGCGAAGAACCCTTCGCCGCCAACGATGCATGAGTGCAACATTTGCGGCAAAATCTTCGGTAGCGGAAAGGCTTTGGGGGGACACAGAAGATCGCACTTTCAGAAGCAGCAGCACCAGAAGAAGGTAAAAGTTCGTTTCAGTAACAATATTCACTCATCACCATCATCAAAACCATGTGGTGATAGGGCTAAGGTTAACAATTGTGGCGATTTCGATGGTGGTGCTGGTGGTGGTGATGATGATGGGAAACGCATGTGCTGCATTTGCAAGAAGGAATTTCCGACCAAGAATGCTTTGTTTGGGCACATGAGGTCTCACCCTGATAGGTCTTGGAGGGGTGTGTCGCCTCCTCTTCATGACAAGAATAACAGCAACAACAACTCTTGTTCTTCTCTTTCTTCTTATTCTTTTTCTTCTTCTTCTTCCCAGAATTCTGATTCTATGGAGAAAAACATCGTGGAAGATGTTGATGATTGTGTTAATGATGATTGTGGTGTAATTGATCTTTTAACTTTTACTTCACCAAGTTGGCTCAAGACTGATGTAAGGGGGAGAAAGTGTATTGGGGGTATCGAGGCTGCTGAAACCCTAGCTTACCTTAGTGCTTATGCTAGGTACTTTTGCGACGGCAGCGGTGGCAATGACGGCGGTGATTGGTCTAATAGGGTTTCGTCCCCCAAGAAGATGGATGAGGTGCTGCCGATGAGTGCTCCACCTCCTCAGACCAAGCATGGGAAGAGAAAGATCGGCAGTGGCGACGAGTCGTCTAGTAAGAAGCACCATGAAGTTAAGAAGATCAAGTTTTGCTTGAAGGGTGAATTGAAGATTGGTAGGAAGAAAAATGATGATGGTGATTATGATTATGATTATGATGATGGTGAGGGTGGTGATGAGCTGATTAATAGGTGCAAGGGCTTATCTGAATCTTGGGTTGAAAAGATGTCATACATGGATGATGATGATGATGAGGTGGTGGAGGAGGAGGAGGGTTTTGGTGATGATGTGGTGAATGCTGAAGTTGTTACTGTTACTACTCCCGTTAGGGTGAAAGATCACGTTGTTGATGAAAAGAAGGTGATGAAAAAGGTGGATCAGAAAGGGAAGAACAGCAGCAGCAGCAGCAAGAAACCGGTGCTGAAATCAAAGGCCAAAGACACAGAAAATGAGAACCAATTAGAGAAAGTGGGAGGGTACAAATGTGGTGCATGTGGGAAAGTGTTCACAACATTCCAAGGCTTAGGAGGACACAGATCGGTGCACAAAGAGAAGAACAATGTAACCAACAACAACAACACTGTTACCACAATGGATGAGTCAAGCAACTACTCAGAAGTAGTAGCTGCTGTTGTTGCTGATCAAGAAAACAACTCTTCAAGCTCTAGTAACATTATGCAGAAGATCGATGAAGCAGCAGCAGCACCATTGCCAGCAACAACAGATGATGCAACAGTAGTGAAGAATGAAGCAGCAGCAGCATGTGAATCCTCAGGTATCAAGAAATTGGACTTCGATCTGAATGAATTGCCCTGTGTCATGGAGGATTAA 1704 0.4437 MDQKEKEKHEVSDHGWVESCKKEKIMMKRSLLDSACKIAEADEESMAVETTPPAKNPSPPTMHECNICGKIFGSGKALGGHRRSHFQKQQHQKKVKVRFSNNIHSSPSSKPCGDRAKVNNCGDFDGGAGGGDDDGKRMCCICKKEFPTKNALFGHMRSHPDRSWRGVSPPLHDKNNSNNNSCSSLSSYSFSSSSSQNSDSMEKNIVEDVDDCVNDDCGVIDLLTFTSPSWLKTDVRGRKCIGGIEAAETLAYLSAYARYFCDGSGGNDGGDWSNRVSSPKKMDEVLPMSAPPPQTKHGKRKIGSGDESSSKKHHEVKKIKFCLKGELKIGRKKNDDGDYDYDYDDGEGGDELINRCKGLSESWVEKMSYMDDDDDEVVEEEEGFGDDVVNAEVVTVTTPVRVKDHVVDEKKVMKKVDQKGKNSSSSSKKPVLKSKAKDTENENQLEKVGGYKCGACGKVFTTFQGLGGHRSVHKEKNNVTNNNNTVTTMDESSNYSEVVAAVVADQENNSSSSSNIMQKIDEAAAAPLPATTDDATVVKNEAAAACESSGIKKLDFDLNELPCVMED 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1432 567 Gene3D Classic Zinc Finger 61 159 - -
Aed10g1432 567 MobiDBLite consensus disorder prediction 299 314 - -
Aed10g1432 567 MobiDBLite consensus disorder prediction 411 443 - -
Aed10g1432 567 ProSiteProfiles Zinc finger C2H2 type domain profile. 451 478 IPR013087 -
Aed10g1432 567 Pfam C2H2-type zinc finger 139 161 - -
Aed10g1432 567 Pfam C2H2-type zinc finger 63 85 - -
Aed10g1432 567 Pfam C2H2-type zinc finger 451 475 - -
Aed10g1432 567 ProSiteProfiles Zinc finger C2H2 type domain profile. 63 90 IPR013087 -
Aed10g1432 567 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 1 567 IPR044653 GO:0003700
Aed10g1432 567 SUPERFAMILY beta-beta-alpha zinc fingers 61 91 IPR036236 -
Aed10g1432 567 ProSitePatterns Zinc finger C2H2 type domain signature. 65 85 IPR013087 -
Aed10g1432 567 ProSiteProfiles Zinc finger C2H2 type domain profile. 137 159 IPR013087 -
Aed10g1432 567 MobiDBLite consensus disorder prediction 271 314 - -
Aed10g1432 567 MobiDBLite consensus disorder prediction 153 181 - -
Aed10g1432 567 ProSitePatterns Zinc finger C2H2 type domain signature. 453 473 IPR013087 -
Aed10g1432 567 PANTHER ZINC FINGER PROTEIN ZAT4-LIKE 1 567 - -
Aed10g1432 567 ProSitePatterns Zinc finger C2H2 type domain signature. 139 159 IPR013087 -
Aed10g1432 567 SMART c2h2final6 63 85 IPR013087 -
Aed10g1432 567 SMART c2h2final6 451 473 IPR013087 -
Aed10g1432 567 SMART c2h2final6 137 159 IPR013087 -
Aed10g1432 567 SUPERFAMILY beta-beta-alpha zinc fingers 138 473 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1432 57 230 C2H2 Transcription Factor Family AT2G26940 29.444 2.53e-17 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed10g1432 zf-C2H2_6 5.8e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1432 - - gmx:102667832 426.402