Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1423 AATAGTTCATACTACAATAATGAAACTGGTCCAAACTGCTCCTTCTTGGTGAAACAGTTCGAAAGGGGCACTCAAAGCGTGGAATTCAGCAGAGAGCCCAACAATCTCTACAACCTCAACACTTTCAAGTACTTTGGTTTAGTAAACAAAATAACTGTCACCATTCAGGATGCTGGAAAGGATCACTGTGTTGCTTGCAACAACCAAGTAGCAAATAACTACGATAGGACTGATCTCGAAAAGGCAGCGTTGGCAAGGTTGAGAGTTGTCAATAGGAGTCTTAGAGTTGCAAAGTCTGGTGTGAAGAAGAGGAATAGACAAGCTGTGAAAAGTTGGGGAAATTATATCACTTAA 354 0.4096 NSSYYNNETGPNCSFLVKQFERGTQSVEFSREPNNLYNLNTFKYFGLVNKITVTIQDAGKDHCVACNNQVANNYDRTDLEKAALARLRVVNRSLRVAKSGVKKRNRQAVKSWGNYIT 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1423 117 Gene3D - 10 117 - -
Aed10g1423 117 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 65 113 - -
Aed10g1423 117 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 12 64 - -
Aed10g1423 117 PANTHER 60S RIBOSOMAL PROTEIN L28 65 113 IPR002672 GO:0003735|GO:0005840|GO:0006412
Aed10g1423 117 PANTHER 60S RIBOSOMAL PROTEIN L28 12 64 IPR002672 GO:0003735|GO:0005840|GO:0006412
Aed10g1423 117 Pfam Ribosomal L28e protein family 12 102 IPR029004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1423 Aed-Chr10 18550340 18551036 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1423 12 108 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 48.438 4.98e-31 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1423 K02903 - gmx:100500189 136.732