Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1420 ATGGTGAATTCAAATCTCTTAGATGCTTTTCTTGATGTAGTTTTTCAGATCAGGCGAGAAATTTCCACAATGAAGTTAATCAAGCATCCAAACGTTGTTCAACTATATGAGGTCATGGGGAGCAAGACAAAAATATACATTATTCTAGAGTTTGCAACTGGGGGAGAGCTCTTTGACAAAGTTGTAAACAATGGGCGAACGAGTGAAAAGGAAGCACGTAGGTATTTCCAGCAGCTTATAAATGCTGTTGATTATTGCCATAGCAGGGGTGTCTACCACAGAGACTTGAAACTAGAGAACTTGCTATTAGATGCTCATGGAAGCCTTAAAATTTCTGATTTTGGATTGAGTGCACTCTCCCAACAAGTCAGGGTCCTGGATGGCAGAGGCTATGATGGGGCAGCTGCAGATTTGTGGTCATGTGGCGTGATCCTCTTTACATTGCTTGCAGGTTACTTTCCTTTTGATGACACTAATCTTTTGAACCTGTATAGAAAAATTTCAGCTGCTGAATTTACCTGCCCTCCTTGGCTTTCTTTTAGTGCCAGGAAATTGATAGCTAGAATCTTGGATCCCAACCCCATGACTGGATTTAAAAGGGAAATAAGGTTCACATCAAAATGCCCTGCCAATGAGATAATCAAGAAGATTGAAGAAGCTGCAAAACCTCTTGGTTTTGATGTGCAGAAGAAAAATTTCAAGGTGCATAAAGCAAAAGGTGACACATTGGAGTTCCTTAAGGTATCCTTGTCTTTGTCTTCCACTTCTCATTGA 774 0.4044 MVNSNLLDAFLDVVFQIRREISTMKLIKHPNVVQLYEVMGSKTKIYIILEFATGGELFDKVVNNGRTSEKEARRYFQQLINAVDYCHSRGVYHRDLKLENLLLDAHGSLKISDFGLSALSQQVRVLDGRGYDGAAADLWSCGVILFTLLAGYFPFDDTNLLNLYRKISAAEFTCPPWLSFSARKLIARILDPNPMTGFKREIRFTSKCPANEIIKKIEEAAKPLGFDVQKKNFKVHKAKGDTLEFLKVSLSLSSTSH 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1420 257 PANTHER SERINE/THREONINE KINASE 13 196 - -
Aed10g1420 257 ProSitePatterns Serine/Threonine protein kinases active-site signature. 91 103 IPR008271 GO:0004672|GO:0006468
Aed10g1420 257 SMART serkin_6 5 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1420 257 ProSiteProfiles Protein kinase domain profile. 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1420 257 PANTHER CBL-INTERACTING PROTEIN KINASE 32 201 236 - -
Aed10g1420 257 PANTHER SERINE/THREONINE KINASE 201 236 - -
Aed10g1420 257 PANTHER CBL-INTERACTING PROTEIN KINASE 32 13 196 - -
Aed10g1420 257 SUPERFAMILY Protein kinase-like (PK-like) 13 195 IPR011009 -
Aed10g1420 257 Pfam Protein kinase domain 16 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1420 257 Gene3D Transferase(Phosphotransferase) domain 1 2 244 - -
Aed10g1420 257 Pfam NAF domain 198 230 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1420 Aed-Chr10 18479044 18484274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1420 193 236 CBL-interacting serine-threonine protein kinases AT2G26980 68.182 4.93e-12 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Aed10g1420 Pkinase 3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1420 - - fve:101298966 316.62