Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1381 ATGGCCTCCATTGCACACAAAAGCGGGTGTTCCAACGAGGACTTTGAGAAGCGTAGCACGATGGAGATGATAAGCGAACCCGTGACGGAATGGGAGAAGCTAAAGCTACTGGGCGAGGGCTCCTACGGAACCGTCTCGCTAGCTGTTCTCACTGCGCCAGAAGAAGCCAAAGGTTCGCTGATAGCCGTCAAGACTTCGAAGCCCAACTGCTTGGATTCGTTGAAGAAAGAAGGAGCCATACTTGATTCCTTCTTCGGCTGCAAAGAAATCCTTCAATGCATCTGGAGTTTATTCACTGTGGACAACAACGGCCGCTTTGTCTACAATCTCATCATGGAGTTCGCTCCCTGCGGTTCCCTCGGTAGCTTTATCAGAAAGCAACCACTTATGGAAAGCCACGTCATCGTCTACACGCGCATGCTCCTCGTAGGGCTCACTGTCGTTCATCAAATCGGAGTAGTCCATGGCGATTTAAAACCCGATAACATACTCCTCTTCCCCTCGCACGACCTAGAGAATATTCATGTTATTGGTGCAAAGTATCAACTCAAGATCGCGGATTTCGGACTCTCCAGGACCAAAGACGAGGACTTCGACGCCGACTTCTGGAAGATGAAGTTCAGAGGAACGCCGTTCTACATGTCGCCGGAGTCTGTGATGGGACAGATCGAGACGCCATTGGATATATGGTCTCTTGGCTGCATCGTTATCGAGATGATAACAGGTTTGCCTGCATGGAAAAACCACGTTACCAACATACGGGAATTGATGTTCAAACTTGCGTTCCTTAAAGAATCGCCGCCATTGCCTTCTGATTTGAGTCCGCTTTGTGAAGATTTCTTGAACAAGTGTTTCGTGAAGGATCCCAGTCAGAGATGGACCGCCAACATGCTTCTCCATCATCCTTTTCTCTCTGCTCCTAAATATCCATGCATGTGGTGA 942 0.4894 MASIAHKSGCSNEDFEKRSTMEMISEPVTEWEKLKLLGEGSYGTVSLAVLTAPEEAKGSLIAVKTSKPNCLDSLKKEGAILDSFFGCKEILQCIWSLFTVDNNGRFVYNLIMEFAPCGSLGSFIRKQPLMESHVIVYTRMLLVGLTVVHQIGVVHGDLKPDNILLFPSHDLENIHVIGAKYQLKIADFGLSRTKDEDFDADFWKMKFRGTPFYMSPESVMGQIETPLDIWSLGCIVIEMITGLPAWKNHVTNIRELMFKLAFLKESPPLPSDLSPLCEDFLNKCFVKDPSQRWTANMLLHHPFLSAPKYPCMW 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1381 313 SMART serkin_6 31 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1381 313 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 29 306 - -
Aed10g1381 313 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Aed10g1381 313 SUPERFAMILY Protein kinase-like (PK-like) 18 307 IPR011009 -
Aed10g1381 313 Gene3D Transferase(Phosphotransferase) domain 1 21 311 - -
Aed10g1381 313 ProSiteProfiles Protein kinase domain profile. 31 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1381 313 Pfam Protein kinase domain 32 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1381 313 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 29 306 - -
Aed10g1381 313 ProSitePatterns Protein kinases ATP-binding region signature. 37 64 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1381 Aed-Chr10 17624603 17625544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1381 30 305 MAP Kinase Kinase Kinase AT4G36950 39.223 1.11e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aed10g1381 Pkinase 4.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1381 - - gmx:102667952 443.351