Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1338 ATGGATTGTTTGCAGAGTCACAGAGCAGAGATGATAAGCATGGCAGTTGCTCTTGTTGCCATTGTTGGTGGCACCGCTTACTATTACTACGTCACCAAGAAGCCAAAAGGGTGCTTGGATCCAGAGAACTTCAAAGAATTTAAACTTGTTAAACGCACTCAACTCAGCCATAATGTTGCCACGTTCAGATTTGATCTTCCTACTCCTAACTCAGTGTTGGGACTTCCTATTGGACAACATATCAGCTGCAGAGGGAAGGATAGTCTTGGTGAAGAAGTTGTGAAACCATATACTCCTACAACGTTGGATACTGATGTTGGATACTTTGAGTTGGTTGTAAAGATGTATCCACAAGGAAGGATGTCTCATTACTTTAGGGAGATGCGTGAAGGTGAGTACATGGCTGTGAAGGGACCAAAGGGACGTTTTAAGTACCAGCCCAATCAAGTAAGAGCTTTTGGTATGATTGCTGGTGGCACTGGCATCACCCCAATGTTTCAAGTTACAAGAGCTATATTAGAAAACCAACAGGACAAAACCAAGATAAATTTGATATATGCCAATGTCACATTAGATGACATTCTTTTGAAGGTAAATCTTCTATATATTCTTGTGTTTTCACATGTGGAACGTTTCTTTGATATGTTTAGAATATGCTCTAATGCAAACTAA 672 0.4018 MDCLQSHRAEMISMAVALVAIVGGTAYYYYVTKKPKGCLDPENFKEFKLVKRTQLSHNVATFRFDLPTPNSVLGLPIGQHISCRGKDSLGEEVVKPYTPTTLDTDVGYFELVVKMYPQGRMSHYFREMREGEYMAVKGPKGRFKYQPNQVRAFGMIAGGTGITPMFQVTRAILENQQDKTKINLIYANVTLDDILLKVNLLYILVFSHVERFFDMFRICSNAN 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1338 223 Gene3D - 138 217 IPR039261 -
Aed10g1338 223 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 200 IPR001834 GO:0016491
Aed10g1338 223 Gene3D Translation factors 34 137 - -
Aed10g1338 223 PRINTS Cytochrome B5 reductase signature 95 102 - -
Aed10g1338 223 PRINTS Cytochrome B5 reductase signature 131 145 - -
Aed10g1338 223 PRINTS Cytochrome B5 reductase signature 154 173 - -
Aed10g1338 223 PRINTS Cytochrome B5 reductase signature 73 84 - -
Aed10g1338 223 PRINTS Cytochrome B5 reductase signature 192 203 - -
Aed10g1338 223 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 42 146 IPR017927 GO:0016491
Aed10g1338 223 Pfam Oxidoreductase FAD-binding domain 47 145 IPR008333 -
Aed10g1338 223 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 200 - -
Aed10g1338 223 CDD cyt_b5_reduct_like 47 212 - -
Aed10g1338 223 Pfam Oxidoreductase NAD-binding domain 155 200 IPR001433 GO:0016491
Aed10g1338 223 SUPERFAMILY Riboflavin synthase domain-like 35 148 IPR017938 -
Aed10g1338 223 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 135 197 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1338 Aed-Chr10 16187845 16192754 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1338 27 200 NADPH P450 reductases AT5G17770 78.161 3.54e-99 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1338 K00326 - gmx:100812559 381.333