Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1334 ATGACGAAGCTTTCTCTTTATGCTTGTTTACTGAATTTGAGTATCTTGGTTCTTCTTCCCTATAGCAAAGCCACTCAAGCTGATAAACTTGAAGAGTTGATTCTGTCTAAGAGCTCACAGAAGCCTCCTGTGACCCTTTCATGGGCAGAGGAAGATGCAGTGCAAACTCATTCTTCTTCTTCTTCTGCTTATAATTATGTTGCATCCCAAGAGGGGCTAAAGGAAGCTGACAAGATTGTGGCATTGCCTGGCCAGCCCTATGGGGTTAATTTTGACCAATATTCAGGCTATGTCACTGTTGATCCAAATGCTGGAAGAGCACTTTTCTATTATTTTGTGGAGTCTCCATATAACCCTTCAACTAAACCTTTAGTTTTGTGGCTAAATGGAGGACCTGGTTGTTCCTCATTGGGGTATGGTGCCTTCGAGGAGTTGGGACCTTTCAGAATAAACTCTGATGGAAAAACACTCTATCGTAACAAATATGCTTGGAATGAAGTGACAAATGTGCTGTTCTTGGAATCCCCTGCTGGAGTCGGCTTTTCCTACTCAAACACTACTTCTGACTATGATCATTCAGGAGATAAGATTACTGCACAAGATGCCTATGTTTTCCTCATTAACTGGCTAGAGAGGTTTCCAGAGTACAAAACCCGCGATTTTTACATAACTGGAGAGAGCTACGCTGGCCATTATGTGCCTCAGCTTGCATACACTATTTTGGTCAACAATAACTTCAGTCAACAAAATATTAACCTCAAAGGCATTGCTATAGGGAATGCTTGGATTGATGATGGTACAAGTTTAAAGGGGATATTTGATTACTTATGGACTCATGCTTTGAGCTCAGATCAAACACACGAGTTGATTGAGAAGTACTGCGATTTCACTTCTGATAGATTTTCAGCAATATGTACCAATGCAACGAATACGGCCTTCAATGAGAATGGAAACATAGACCCTTATAACATCTATGCACCTCTGTGTCACGACTCTTCTCTCAAAAATGGATCAACTGGTTCTGTATATGACTTTGACCCGTGTTCTGATAACTACGGGGATGCCTATCTAAATAGGCCAGAGGTCCAACTAGCTCTTCATGCAAAACCCACAAACTGGACCCACTGCAGTGGTGATATTGATTCAGTGGTGCCAGTCACATCTTCCCGATATTCAATCAACGCCCTAAACCTCCCTATCCAGGCTCCTTGGCGTCCATGGTATTCTGGAAATGAGGTTGGAGGATATGTGGTGAAATACAATGGAGTAACATTTGTTACAGTAAGAGGAGCAGGACATCTTGTTCCAAGCTGGCAACCAGCACGCGCTCTGACTTTGATCTTCTCATTCCTCTATGGAAGCCTGCCTCCTGCTTCACCATGGAATTAG 1389 0.4269 MTKLSLYACLLNLSILVLLPYSKATQADKLEELILSKSSQKPPVTLSWAEEDAVQTHSSSSSAYNYVASQEGLKEADKIVALPGQPYGVNFDQYSGYVTVDPNAGRALFYYFVESPYNPSTKPLVLWLNGGPGCSSLGYGAFEELGPFRINSDGKTLYRNKYAWNEVTNVLFLESPAGVGFSYSNTTSDYDHSGDKITAQDAYVFLINWLERFPEYKTRDFYITGESYAGHYVPQLAYTILVNNNFSQQNINLKGIAIGNAWIDDGTSLKGIFDYLWTHALSSDQTHELIEKYCDFTSDRFSAICTNATNTAFNENGNIDPYNIYAPLCHDSSLKNGSTGSVYDFDPCSDNYGDAYLNRPEVQLALHAKPTNWTHCSGDIDSVVPVTSSRYSINALNLPIQAPWRPWYSGNEVGGYVVKYNGVTFVTVRGAGHLVPSWQPARALTLIFSFLYGSLPPASPWN 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1334 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 183 IPR001563 GO:0004185|GO:0006508
Aed10g1334 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 172 IPR001563 GO:0004185|GO:0006508
Aed10g1334 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 209 234 IPR001563 GO:0004185|GO:0006508
Aed10g1334 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 423 436 IPR001563 GO:0004185|GO:0006508
Aed10g1334 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 377 IPR001563 GO:0004185|GO:0006508
Aed10g1334 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 377 458 IPR001563 GO:0004185|GO:0006508
Aed10g1334 462 ProSitePatterns Serine carboxypeptidases, serine active site. 223 230 IPR018202 GO:0004185
Aed10g1334 462 PANTHER CARBOXYPEPTIDASE 377 458 - -
Aed10g1334 462 Gene3D alpha/beta hydrolase 73 331 IPR029058 -
Aed10g1334 462 ProSitePatterns Serine carboxypeptidases, histidine active site. 423 440 IPR033124 GO:0004185
Aed10g1334 462 Gene3D - 348 378 - -
Aed10g1334 462 Gene3D - 379 454 - -
Aed10g1334 462 PANTHER CARBOXYPEPTIDASE 18 377 - -
Aed10g1334 462 SUPERFAMILY alpha/beta-Hydrolases 80 453 IPR029058 -
Aed10g1334 462 Pfam Serine carboxypeptidase 83 380 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1334 Aed-Chr10 15624931 15628629 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1334 377 454 Calmodulin-binding Proteins AT2G22960 35.443 5.07e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1334 K16297 - gmx:100790394 842.032