Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1332 ATGAAGAAGCTTTCTCTTTATACTTGTTTACTCATCACATTGAGTTTCTTGATTTTTCTTCCCCATACCAAAGCAAGTCAGGCTAAGAAACTTGATAAGTTGATCCTATCTAGAAGCTCACAAAATCCTCCAGTGACCCTTTCTTGGGCAGAGGAAGATGCACTGAAAATGCATTCTTCTGCTTATTATGTTGCATCCCAAGGGGGTCTAAAGCAAGCTGACAAGATTGTCACACTGCCTGGCCAGCCCCATGGGGTGAACTTTGACCAATATTCAGGCTATGTCACAGTTGATCCAAAGGCTGGAAGATCACTTTTCTATTATTTTGTTGAGTCTCCACATAACTCTTCAGCTAAACCTTTGGTATTGTGGCTCAATGGAGGTCCAGGTTGCTCCTCATTGGGGTATGGGGCATTTGAGGAGTTGGGACCCTTTAGAGTAAACTCTGATGACAAAACACTGTTTCATAACAAATATGCTTGGAATGAAGTGGCAAATGTGCTGTTCTTGGAATCACCTGCTGGAGTTGGCTTTTCCTACTCAAACACTACTTCTGACTATGATCATTCAGGAGATAAGTCTACTGCACAGGATGCCTATGTTTTCCTCATCAATTGGCTAGAGAGGTTTCCAGAGTACAAAACCCGCGATTTTTACATAACTGGAGAGAGCTATGCTGGCCATTATGTGCCTCAGCTTGCATACACTATTTTGGTCAACAATAAATCCAGTCACCAAAATATTAACCTCAAAGGCATAGCTATAGGGAATGCTTGGATTGATGATGTTACAACTATCAAGGGGATATTTGACTATTTTTGGACTCATGCTTTGAACTCAGATGAAACACATTATTTGACTAAGAAGTATTGCGACTTCACTGCTGAAAATATTTCAGCAGCATGTATTAATGCAACAATAAGCTCCATAATTGAAAAAGGAATAATAGACTCCTCTAACATCTATGCTCCACTGTGTTATGACTCTTCTCTGAAAAATGGATCTACTGGTTCTGTATATGATTTTGACCCATGTTCTGCCTACTATGTGGAAGCCTATCTAAATAGGCCAGAGGTCCAAAAAGCTCTTCATGCAAAACCCACAAATTGGACCCATTGCAGTGGTTTTGACTGGAAGGATAGCCCAAGTACCATCCTACCCATCATTAATGGTGATACTGATGCAACGGTCCCAGTCACATCTTCCAGATATTCAATCAACACCCTGAGGCTCCCTATTCAGGTTGATTGGCATCCATGGTATTCTGGAAATGAGGTTGGAGGATATGTGGTGGGATACAAAGGAATGACATTTGTTACAGTAAGAGGAGCAGGACAATTTGTTCCAAGTTGGCAACCAGTCCGGTCTCTTACCATGATCTCTTCATTCCTCTCTGGAACCCTGCCTCCTGCTTCACCTTATTAA 1425 0.4154 MKKLSLYTCLLITLSFLIFLPHTKASQAKKLDKLILSRSSQNPPVTLSWAEEDALKMHSSAYYVASQGGLKQADKIVTLPGQPHGVNFDQYSGYVTVDPKAGRSLFYYFVESPHNSSAKPLVLWLNGGPGCSSLGYGAFEELGPFRVNSDDKTLFHNKYAWNEVANVLFLESPAGVGFSYSNTTSDYDHSGDKSTAQDAYVFLINWLERFPEYKTRDFYITGESYAGHYVPQLAYTILVNNKSSHQNINLKGIAIGNAWIDDVTTIKGIFDYFWTHALNSDETHYLTKKYCDFTAENISAACINATISSIIEKGIIDSSNIYAPLCYDSSLKNGSTGSVYDFDPCSAYYVEAYLNRPEVQKALHAKPTNWTHCSGFDWKDSPSTILPIINGDTDATVPVTSSRYSINTLRLPIQVDWHPWYSGNEVGGYVVGYKGMTFVTVRGAGQFVPSWQPVRSLTMISSFLSGTLPPASPY 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1332 474 Gene3D - 345 376 - -
Aed10g1332 474 Gene3D - 383 466 - -
Aed10g1332 474 Pfam Serine carboxypeptidase 80 466 IPR001563 GO:0004185|GO:0006508
Aed10g1332 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 180 IPR001563 GO:0004185|GO:0006508
Aed10g1332 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Aed10g1332 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 169 IPR001563 GO:0004185|GO:0006508
Aed10g1332 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 206 231 IPR001563 GO:0004185|GO:0006508
Aed10g1332 474 ProSitePatterns Serine carboxypeptidases, serine active site. 220 227 IPR018202 GO:0004185
Aed10g1332 474 PANTHER CARBOXYPEPTIDASE 19 471 - -
Aed10g1332 474 SUPERFAMILY alpha/beta-Hydrolases 73 468 IPR029058 -
Aed10g1332 474 Gene3D alpha/beta hydrolase 71 328 IPR029058 -
Aed10g1332 474 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 19 471 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1332 Aed-Chr10 15580493 15584878 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1332 388 466 Calmodulin-binding Proteins AT2G22960 35.000 6.04e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1332 K16297 - gmx:100778342 898.271