LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed10g1316	ATGGGAGAAGATCTTGGCCCTCTAAGCAGCAAGGAGCTTGAGTCACTTGAAAGGCAGCTAGATTCATCTTTGAGGCAAATCAAATCAACAAGGACCCAATTCATGCTGGATCAGCTTTCTGATCTACAACGTAAGTTGGGAGAGTATCTCCAACTCCAATTAAATCCCAGTGCTGAAGAAATGGGGTATGGACGCCATCCCCAAGGCGGCTGA	213	0.4695	MGEDLGPLSSKELESLERQLDSSLRQIKSTRTQFMLDQLSDLQRKLGEYLQLQLNPSAEEMGYGRHPQGG	70

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed10g1316	70	ProSiteProfiles	K-box domain profile.	1	62	IPR002487	GO:0003700\|GO:0005634\|GO:0006355
	Aed10g1316	70	PANTHER	MADS-BOX TRANSCRIPTION FACTOR	3	45	-	-
	Aed10g1316	70	Coils	Coil	13	33	-	-
	Aed10g1316	70	Pfam	K-box region	1	47	IPR002487	GO:0003700\|GO:0005634\|GO:0006355
	Aed10g1316	70	PANTHER	MADS BOX PROTEIN	3	45	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed10g1316	Aed-Chr10	14694616	14695528	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed10g1316	1	65	MADS-box Gene Family	AT1G24260	72.059	3.62e-24	88.6

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed10g1316	-		-	gmx:547686	105.916

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