Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1316 ATGGGAGAAGATCTTGGCCCTCTAAGCAGCAAGGAGCTTGAGTCACTTGAAAGGCAGCTAGATTCATCTTTGAGGCAAATCAAATCAACAAGGACCCAATTCATGCTGGATCAGCTTTCTGATCTACAACGTAAGTTGGGAGAGTATCTCCAACTCCAATTAAATCCCAGTGCTGAAGAAATGGGGTATGGACGCCATCCCCAAGGCGGCTGA 213 0.4695 MGEDLGPLSSKELESLERQLDSSLRQIKSTRTQFMLDQLSDLQRKLGEYLQLQLNPSAEEMGYGRHPQGG 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1316 70 ProSiteProfiles K-box domain profile. 1 62 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aed10g1316 70 PANTHER MADS-BOX TRANSCRIPTION FACTOR 3 45 - -
Aed10g1316 70 Coils Coil 13 33 - -
Aed10g1316 70 Pfam K-box region 1 47 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aed10g1316 70 PANTHER MADS BOX PROTEIN 3 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1316 Aed-Chr10 14694616 14695528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1316 1 65 MADS-box Gene Family AT1G24260 72.059 3.62e-24 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1316 - - gmx:547686 105.916