Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1313 ATGGAATTGAAAAAAAAGGGCAAGCTTGTCAGGCTCTACACGAATGGCAAAAAGCATAAGGAATCGCTTTGGGGAGCAACCGAGCCTCCGGGGCTTAAACCTAGCAATTTGCTACCCTTAGGGAAAAATAGAATTGCTGAAACATTTAGAATTGGAGGGTCGAAGGTATTCCCAGAGGACCACGAGCCGTGGCGCAAACGAATACTTGACCCGGGTAGTGAGATTGTGTTGAAATGGAACCGGGTCTTCATAGTTTCATGCTTGGTGGCTCTTTTTGTTGATCCACTGTACTTTTATTTGCCTAGTGTGATAGAAAATAAAGGGTCTTCATGTGTAAGGACAGACCTCACCTTGCGCATTGTTGTGACCTTTCTTCGCACTATTGCGGACCTTTTTTATCTGCTGCACCTGATAATTAAGTTTAGGACAGCATATGTGGCACCAAGCTCGCGGGTATTTGGCAGGGGTGAACTTGTCATGGACCCAAAGAAGATTGCAAGGAGATATATCAGATCTGATTTCTTCATTGATTTAATTGCCACACTCCCTCTACCTCAGATGGTCATTTGGTTTATTATACCAGCAACAAGAAGCCCTCAAACGGATCACAAGAATAATGCGCTTGCATTGATTGTTTTGCTTCAATATGTTCCAAGATTATATTTGATTTTTCCATTAAGTTCTCAAATAATCAAAGCAACAGGAGTGGTTACGAAGACTGCTTGGGCAGGAGCTGCATATAATTTGCTGTTGTATATGTTAGCTAGCCATGTTTTAGGGGCAGCTTGGTATCTTCTATCCGTCGACCGATACACTACTTGTTGGAAATCCTTTTGCAAAAAGGAACATAATCCTGAAAATTGCTTTCTTTACCTAGACTGCAGTTCTTCAAATATTAAGTTGCGCGAGATATGGGCAAATAGTACAAATGTGTTTAGCAGCTGTGATCCCAGTAACGATGATATTAATTTCAAGTATGGAATATTTGAAAATGCAGTAAAGAAACATGTTGTCTCTTCAAACTTTATCCCAAAATACCTTTATTGTTTATGGTGGGGATTGCAACAATTAAGTTCTTATGGGCAGAACCTAGAAACTAGCACCTTTATTGGAGAAACATCATTTGCTATTGTCATTGCCATCTTGGGTCTTGTATTATTTTCCCATTTGATTGGGAACATGCAGACATATTTGCAATCAATTACTATAAGGCTTGAGGAGTGGAGGCTTAAGCGAAGAGACACAGAGGAGTGGATGAGGCATCGTCAACTCCCTGAAGATTTGAGAAGTCGTGTTAGACGATTTGTTCAATATAAATGGCTTGCTACTCGTGGAGTTGATGAAGAAACCATTCTACGTGCATTACCTGCTGATCTTCGTCGTGATATCCAATGCCATTTGTGCTTAGACCTTGTTAGAAGAGTTCCCTTCTTCTCACAGATGGATGATCAGCTTCTGGATGCAATATGTGAGCGGCTGGTATCGTCTCTGAGCACTCAAGGCACCTACATTGTTCGTGAGGGTGACCCTGTGACTGAAATGCTTTTTATCATTAGAGGTAGACTGGATAGTTCTACTACAAATGGTGGCCGTACTGGTTTCTTCAACTTAATCATATTGAGACCTGGAGATTTTTGTGGGGAGGAATTACTTTCGTGGGCTTTACTCCCAAAATCAACCATCAATTTGCCATCTTCAACTAGGACAGTTAAAGCCCTAAGTGAGGTTGAAGCTTTTGCTTTACGGGCCGAAGACCTCAAGTTTGTTGCTAATCAATTTAGGCGCCTTCATAGTAAGAAGCTGCAGCACACTTTTCGATTTTATTCCCACCATTGGAGGACTTGGGCAGCCTGCTTTATACAGGCTGCTTGGCGCCGATATAAGAAAAGGATGACTATGAAAGACCTCAGTTTGAGGGAATCCATTCCTTTAGATGAAACAGTAGCTAGTGGGAGAGAACATGAGGACTATGCTGCTCGTTCAAATTCAGCTCAGGCTAAATTGAACCTTGGAGCTACAATTCTTGCTTCGAGATTTGCTGCTAACACACGAAGAGGAGCTCTGAAGATTAAAGATGACATGCCCCAGTTACAGAAGCCTGAAGAACCTGACTTTTCCACTGAAGCTGATGATGATTAG 2139 0.418 MELKKKGKLVRLYTNGKKHKESLWGATEPPGLKPSNLLPLGKNRIAETFRIGGSKVFPEDHEPWRKRILDPGSEIVLKWNRVFIVSCLVALFVDPLYFYLPSVIENKGSSCVRTDLTLRIVVTFLRTIADLFYLLHLIIKFRTAYVAPSSRVFGRGELVMDPKKIARRYIRSDFFIDLIATLPLPQMVIWFIIPATRSPQTDHKNNALALIVLLQYVPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGAAWYLLSVDRYTTCWKSFCKKEHNPENCFLYLDCSSSNIKLREIWANSTNVFSSCDPSNDDINFKYGIFENAVKKHVVSSNFIPKYLYCLWWGLQQLSSYGQNLETSTFIGETSFAIVIAILGLVLFSHLIGNMQTYLQSITIRLEEWRLKRRDTEEWMRHRQLPEDLRSRVRRFVQYKWLATRGVDEETILRALPADLRRDIQCHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGRLDSSTTNGGRTGFFNLIILRPGDFCGEELLSWALLPKSTINLPSSTRTVKALSEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKKRMTMKDLSLRESIPLDETVASGREHEDYAARSNSAQAKLNLGATILASRFAANTRRGALKIKDDMPQLQKPEEPDFSTEADDD 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1313 712 Pfam Ion transport protein 79 403 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aed10g1313 712 Gene3D - 82 402 - -
Aed10g1313 712 SUPERFAMILY Voltage-gated potassium channels 73 399 - -
Aed10g1313 712 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 40 709 - -
Aed10g1313 712 MobiDBLite consensus disorder prediction 690 712 - -
Aed10g1313 712 Gene3D Helix hairpin bin 405 468 - -
Aed10g1313 712 ProSiteProfiles cAMP/cGMP binding motif profile. 477 607 IPR000595 -
Aed10g1313 712 SUPERFAMILY cAMP-binding domain-like 407 599 IPR018490 -
Aed10g1313 712 Gene3D Jelly Rolls 475 595 IPR014710 -
Aed10g1313 712 PRINTS EAG/ELK/ERG potassium channel family signature 137 146 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed10g1313 712 PRINTS EAG/ELK/ERG potassium channel family signature 254 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed10g1313 712 PRINTS EAG/ELK/ERG potassium channel family signature 372 383 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed10g1313 712 PRINTS EAG/ELK/ERG potassium channel family signature 390 399 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed10g1313 712 PRINTS EAG/ELK/ERG potassium channel family signature 440 447 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aed10g1313 712 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 40 709 - -
Aed10g1313 712 SMART cnmp_10 477 608 IPR000595 -
Aed10g1313 712 Pfam Cyclic nucleotide-binding domain 500 588 IPR000595 -
Aed10g1313 712 CDD CAP_ED 477 608 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1313 Aed-Chr10 14617289 14625714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1313 1 711 Ion Channels AT4G30360 69.822 0.0 1018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1313 K05391 - gmx:100810967 1388.24