Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1300 ATGAAACAGCAAGAGGAGGGCACGTTCGAAACAGCAGAGGAAGCAGCACGAGCCTACGACCAAGCCGCGATACTGATGAGTGGGCGAAACGCGAAAACCAACTTCCCAATAGTCCAAACCCCAGAGGATGACCCAAAGACAATCCTAACACCACCCACCGCCGCCGCCGATCACGAGACCCGATCATCGACGACGCCTACGACGACCTCGAAGGAACTGGAAGAGATTCTTCACGCAAAGCTTCGCAAGTGCGGGAAGCTCCCGTCCCCTTCCATGACCTGCCTGAGGCTCGACCCTGAGAACTCCCACATCGGAGTGTGGCAGAAGCGCGCCGGCCAGCGCTCGGACTCCAACTGGCTCCTGATGGTCCCTCCCGTTGTAAAAACTGGTGGTGCCGCCATTGAAGGTAATAATAATAACATTGGAGTTGGTTCATCGCCTATTAGTTCGTCTTCGTTTTCCGAGTGCAATGATCAGATCCACCAGCAGCAGCAAGTGGCGAGGCAGGAGCTTGATAAAAAGAGAGGATGGAATCATGGAAAGGAATGTGACTTTTTTTTTGTCTTCTCCTTTTCCTAA 579 0.532 MKQQEEGTFETAEEAARAYDQAAILMSGRNAKTNFPIVQTPEDDPKTILTPPTAAADHETRSSTTPTTTSKELEEILHAKLRKCGKLPSPSMTCLRLDPENSHIGVWQKRAGQRSDSNWLLMVPPVVKTGGAAIEGNNNNIGVGSSPISSSSFSECNDQIHQQQQVARQELDKKRGWNHGKECDFFFVFSFS 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1300 192 CDD AP2 7 38 IPR001471 GO:0003700|GO:0006355
Aed10g1300 192 PANTHER AP2-EREBP TRANSCRIPTION FACTOR 7 169 - -
Aed10g1300 192 MobiDBLite consensus disorder prediction 35 70 - -
Aed10g1300 192 SMART rav1_2 1 42 IPR001471 GO:0003700|GO:0006355
Aed10g1300 192 Gene3D AP2/ERF domain 2 38 IPR036955 GO:0003700|GO:0006355
Aed10g1300 192 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 7 169 - -
Aed10g1300 192 MobiDBLite consensus disorder prediction 56 70 - -
Aed10g1300 192 ProSiteProfiles AP2/ERF domain profile. 1 36 IPR001471 GO:0003700|GO:0006355
Aed10g1300 192 SUPERFAMILY DNA-binding domain 7 37 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1300 Aed-Chr10 14209550 14210779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1300 7 123 AP2-EREBP Transcription Factor Family AT1G15360 58.120 1.36e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1300 - - gmx:100779921 205.297