Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1292 ATGGCCACGAAAGGCTTTTGGTATACGAGTATATGCGTCGGGACATTAACACAGCATCTCTTTCATTGGCGTCAAAATGGCTCTGCTCCGTTGTCTTGGAAACAAAGGGTGTCCATAGCTTTGGATGTAGCGCGAGTGGAATACTTGCACCGCCTAGCTCAGCAAAGCTTTATTCACAGGGACATAAAACCCTCAAACATATTATTGGGTGATGATATGAGAGCCAAGGTTGCAGATTTTGGTTTGGTTAAAAATGCGCCAGATGGAATGGATTCTGTCTCGACGCGAGTGGCTGGAACATTTGGATATCTAGCACCTGAACATGTAGCTACGGGAAGAGTGACGATTAAAGTAGATGTGTACGCAATTGGAATAGTTTTGATGGAACTGATTACCGGTAGAAAGGCACTGGACAATACCGTGGCTGAAGAAATGTCTCACTTAGCTTCATGGTTCCGTAGGATACTAACCAACATGGAAAATATCCCAATGGCAATTGATCAAACTCTGAACCCCGACGAGGAAACCATGGAGAGCATATATAAGGTTGCTGAGCTGGCAGGCCATTGCACTGCTCTTGAACCACACCAAAGGCCGGATCTGGGGCATGTAGTGAATGTATTGGTTCCTCTGGTGGAGCAATGGAACCCTACTTGCAGCCATGAAGAAGGTTATGACATGAACAATGAAGGCACTTATGACATGTCCTTCTCGGAAATACTATTGGGCCGTTGA 735 0.4558 MATKGFWYTSICVGTLTQHLFHWRQNGSAPLSWKQRVSIALDVARVEYLHRLAQQSFIHRDIKPSNILLGDDMRAKVADFGLVKNAPDGMDSVSTRVAGTFGYLAPEHVATGRVTIKVDVYAIGIVLMELITGRKALDNTVAEEMSHLASWFRRILTNMENIPMAIDQTLNPDEETMESIYKVAELAGHCTALEPHQRPDLGHVVNVLVPLVEQWNPTCSHEEGYDMNNEGTYDMSFSEILLGR 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1292 244 PANTHER RECEPTOR-LIKE KINASE TMK4 11 241 - -
Aed10g1292 244 SUPERFAMILY Protein kinase-like (PK-like) 14 208 IPR011009 -
Aed10g1292 244 SMART serkin_6 1 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1292 244 Gene3D Transferase(Phosphotransferase) domain 1 13 231 - -
Aed10g1292 244 PANTHER OSJNBA0070M12.3 PROTEIN 11 241 - -
Aed10g1292 244 ProSiteProfiles Protein kinase domain profile. 1 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1292 244 Pfam Protein kinase domain 31 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1292 244 ProSitePatterns Serine/Threonine protein kinases active-site signature. 57 69 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1292 Aed-Chr10 13925896 13933857 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1292 8 208 Receptor kinase-like Gene Family AT5G56890 46.569 2.44e-48 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Aed10g1292 Pkinase 3.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1292 - - ccaj:109809286 374.015