Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1262 ATGAGTTTCCACACTTCCAATTCCACAGGAAGAATTGTTGTTGAAGACGTGGAATCATCACCGTTGGCGTCGCCACTGCTGAGAAACAGAGACAAAGATGAAGGTTCAGGTTCAATGGCGGTGGCATCGGTCCCAGGTTCCGTGTTCAGTCTGTCAACCACGATCATGGGCGCCGGAATCATGGCCTTACCTGCAGCCATCAAAGTCGTTGGTGTCGGTGTCGGCATCGGCGCCATCCTCTTCCTGGCATTCCTCACGCACGCCTCTCTGGAGATTCTCCTCCGGTTCAGCAGAGCTGCCAAGGCTGACAGCTACGCCAGCCTCATGGGGAATGCCTTCGGGAGCTCCGGAACCCTGCTGTTTCACCTCTCCGTGCTTGTCAACAACTTTGGGATACTTGTTGTCTACGTCATCATAATCGGCGACGTCTTGTCCGGAACGTCATCTTCAAGTGGTGGCGGCGGCGGTGTTCATCATTCTGGGGTGCTTGAAGGGTGGTTCGGGCAGGGCTGGTGGACTGCCCGTACTTTTATTCTGCTTCTCACGACGATCTTTGTGTTTGCTCCACTGGGGTTCTTCAAGAGGATAGTGGCTCTGGCTATTGTGTTTCTACTCATAACTGCGGGAATTACATTCGTCAAATTGTTCAATGGCAGTATAGCTAGTCCAAGGTTGCTTCCTAATATCACTGATGTTTCATCCATATGGAATCTCTTTACAGCAGTTCCAGTTTTTGTGACAGCATTCGTTTGTCACTACAATGTTCATACAATTGACAACGAGTTAGGAGATCCTTCCCTGATGCAACCAGTTATATGCGCATCACTGGTTCTGTGTTCCAGCATTTATATTCTCACAGCAGTATTTGGATTTCTCCTATTTGGCGAGTCAACACTCGATGATGTGCTGGCCAACTTTGATACTGATCTTGGCATCCCTTATAGCAATATACTCAATGACATTGTTCGTATCAGCTACGCCCTCCATCTCATGCTTGTTTTCCCAGTTATCTTCTTCTCGCTGCGCTTCAATTTGGACAATCTTTTCTTTCCTTCAGCTAGGTCCTTGGATTTGGACAAGTGTAGGTTTGTCTTGATCACCACTGTACTCACGGCTTTGATCTATGTGGCTGCAAACTTTGTGCCTAGCATCTGGGATGCATTTCAATTCACTGGAGCAACCGCCACCGTTTGCCTTGGGTTTATTTTCCCTGCTGCAGTTACTCTTAGGGATCCCCATGGCATTGCAACAAAGAATGACAAGATTTTATCCATTGTCATGATTTTTCTGGCTGTGTTCTCAAACGTTGTGGCTGTATACAGTAATGCTGATGCCTTGTTCAGAAAACATGTGGATCCTCATCATTGA 1368 0.4759 MSFHTSNSTGRIVVEDVESSPLASPLLRNRDKDEGSGSMAVASVPGSVFSLSTTIMGAGIMALPAAIKVVGVGVGIGAILFLAFLTHASLEILLRFSRAAKADSYASLMGNAFGSSGTLLFHLSVLVNNFGILVVYVIIIGDVLSGTSSSSGGGGGVHHSGVLEGWFGQGWWTARTFILLLTTIFVFAPLGFFKRIVALAIVFLLITAGITFVKLFNGSIASPRLLPNITDVSSIWNLFTAVPVFVTAFVCHYNVHTIDNELGDPSLMQPVICASLVLCSSIYILTAVFGFLLFGESTLDDVLANFDTDLGIPYSNILNDIVRISYALHLMLVFPVIFFSLRFNLDNLFFPSARSLDLDKCRFVLITTVLTALIYVAANFVPSIWDAFQFTGATATVCLGFIFPAAVTLRDPHGIATKNDKILSIVMIFLAVFSNVVAVYSNADALFRKHVDPHH 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1262 455 Pfam Transmembrane amino acid transporter protein 42 441 IPR013057 -
Aed10g1262 455 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 13 453 - -
Aed10g1262 455 PANTHER AMINO ACID TRANSPORTER 13 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1262 Aed-Chr10 12969825 12974894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1262 19 450 Amino Acid or Auxin Permease AAAP Family AT3G30390 59.819 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1262 K14207 - gmx:100778699 733.406