Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1257 ATGAGGGGCGGTGAGGGGCGAGGGATTAGGAAGAAGGGAAGCGGAGTGAGGCAATGGCTGGTCCTGGAGGGCAGAGGAGAGACGCAGGTGGTGGAGGCAGGGAAGCACGCAATCATGAGGCGAACGGGGCTCCCGGCACGTGACATGCGGATACTGGACCCTCTCCTGTCTTACCTTTCGACCCTTCTAGGGCGTGAGAGGGCGATCGTGATAAACTTGGAGCACATAAAGGCCATCATAACGGCGAACGAGGTCCTTCTCCTGAACTCCCGCGACCCATCAGTGACCCCCTTCGTACAGGAGCTCCAGGCAAGGATAATCCGGCACCAGCAAGCCCCCAATCCGGATCCTGATCCTCACCACGACCATGAGGCCATAAAGATTCTCCCCTTCGAGTTCGTAGCCCTTGAGGCATGTCTTGAGGCCGCCTGTAGCGTTTTGGAAAACGAGGCAAAGACTCTTAAACAGGAGGCTCATCCCGCCTTGGACAAGCTCACCTCCAAGATCAGTACTCTCAATTTGGAACGCGTTCGTCAGATTAAGAGCCGCTTAGTCGCCATCACTGGTCGCGTTCATAAGGTCAGGGATGAATTGGAGCACTTGCTCGACGACGACGATGATATGGGTGAGATGGTGGACACCCGCGCTAGCTCCACCTACAGTGCCGTCACCAAGCAACTTGATGTTGAGGAGCTTGAGATGCTCTTGGAGGCTTACTTTGTGCAGATTGATGGCACCTTGAACAAGCTCTCTACGTTGAGGGAGTACGTTGATGACACTGAGGATTATATCAACATAATGCTGGATGACAAACAGAACCATCTCCTCCAAATGGGAGTCATGTTGACCACAGCAACTCTGGTAGTGAGTGCCTTTGTTGTTGCGGCCGGTATTTTTGGCATGAATATTCACATTGAGCTATTTGACGATACTAAAGCTGGGATGTCACAGTTCCTCTGGACTGTTGGTGGTAGCACTGCAGGGACCATATTCTTGTATGTGGTTGCCATTGCCTGGTGTAAGCACAAATGCTTGCTAGAGTAA 1044 0.5268 MRGGEGRGIRKKGSGVRQWLVLEGRGETQVVEAGKHAIMRRTGLPARDMRILDPLLSYLSTLLGRERAIVINLEHIKAIITANEVLLLNSRDPSVTPFVQELQARIIRHQQAPNPDPDPHHDHEAIKILPFEFVALEACLEAACSVLENEAKTLKQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVHKVRDELEHLLDDDDDMGEMVDTRASSTYSAVTKQLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVAAGIFGMNIHIELFDDTKAGMSQFLWTVGGSTAGTIFLYVVAIAWCKHKCLLE 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1257 347 Gene3D Magnesium transport protein CorA, transmembrane region 92 275 - -
Aed10g1257 347 Gene3D - 7 90 - -
Aed10g1257 347 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 122 213 - -
Aed10g1257 347 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 214 347 - -
Aed10g1257 347 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 6 111 - -
Aed10g1257 347 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 122 213 IPR039204 -
Aed10g1257 347 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 214 347 IPR039204 -
Aed10g1257 347 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 6 111 IPR039204 -
Aed10g1257 347 CDD Mrs2_Mfm1p-like 19 343 IPR039204 -
Aed10g1257 347 Coils Coil 137 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1257 Aed-Chr10 12853314 12858380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1257 8 346 MRS2 Gene Family AT1G16010 45.792 6.57e-106 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1257 - - gmx:100819578 546.969