Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1252 ATGGATGGGAACAAAGACGACGCGATGAAATGTTTGAGAATCGGCAAAGAGGCGTTAGAAAGCGGCGATCGTTCACGCGCGTTGAAGTTCGTGACGAAGGCGCGTCGCCTCGACCCCACCCTCGCCGTCGACGATCTACTGTCCACGATAGAGGCGGATGCAGGGGATCCGCCCTCCGCTGCGGAGGATGAGGCGTCGGTGGGCCCCACGAAGCCCGCCGATCAGCCTTCTATCCGCCGCAGGGCCGCTGCGGCGGCCCCGGCCGCCGCCTCGTCCTCTTCGGTATCATACACCGAAGAGCAAGTCTCAATTATCAGAGAGATTAAGAGAAAGAAAAACTTTTATGAAATATTGGGATTGGAGAAAACCTGCACTGTTGAGGATGTGAGGAAATCATACAGGAAGCTCTCACTTAAGGTTCATCCCGATAAGAACAAAGCCCCGGGTGCCGAGGAAGCGTTCAAGGCCGTTTCGAAGGCGTTTCAGTGTCTCAGTAGTGAAGAAAGTAAGAGAAAGTACGATGTCTCAGGTGAGGACGAGGCGGTTTACGAGCAGCGCACAGCAAGACCCGCGGCAAGGGGCTATAATAATGGTTACTATGAGGCTGATATTGATGCTGAGGAGATTTTCAGGAACTTCTTCTTTGGAGGAATGGCCCCTGCAACAAATTTCAGAGGATTCAGTTTTGGACCAGCTGGTTTCAATGGGTTCAATGGTGGCCACAGGCCTGCTGAACATGGTTCCGGTGGTTTTAATACTCGCGCTTTGATTCAGTTGCTGCCTGTGCTGCTGATTATTCTTATAAACTTTTTGCCTTCATCGGAACCCCTGTATTCACTGTCAAAGAGTTATCCTTATGAACATCGGTTTACCACACCCAAGAGTGTTAACTATTATGTCAAATCTACAAATTTTGCTCAGGAGTATCCTCCGAAGAGTGAGGAACGAGGGACACTTGAAGAAAAGGTGGAGAGGGAGTACTTCAGCGTTCTCCGCCAGAATTGTCATTTTGAGTTGCAGCGCCGCCAGTGGGGGTATATCCGAGAAACGCCACACTGCGATATGTTGCGGAAGTTTGAGGTGGTGAATTGA 1092 0.5082 MDGNKDDAMKCLRIGKEALESGDRSRALKFVTKARRLDPTLAVDDLLSTIEADAGDPPSAAEDEASVGPTKPADQPSIRRRAAAAAPAAASSSSVSYTEEQVSIIREIKRKKNFYEILGLEKTCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSSEESKRKYDVSGEDEAVYEQRTARPAARGYNNGYYEADIDAEEIFRNFFFGGMAPATNFRGFSFGPAGFNGFNGGHRPAEHGSGGFNTRALIQLLPVLLIILINFLPSSEPLYSLSKSYPYEHRFTTPKSVNYYVKSTNFAQEYPPKSEERGTLEEKVEREYFSVLRQNCHFELQRRQWGYIRETPHCDMLRKFEVVN 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1252 363 CDD DnaJ 113 165 IPR001623 -
Aed10g1252 363 Gene3D DnaJ domain 109 225 IPR036869 -
Aed10g1252 363 SUPERFAMILY Chaperone J-domain 109 227 IPR036869 -
Aed10g1252 363 SMART dnaj_3 112 169 IPR001623 -
Aed10g1252 363 PANTHER AT29763P-RELATED 1 361 - -
Aed10g1252 363 Pfam DnaJ domain 113 174 IPR001623 -
Aed10g1252 363 MobiDBLite consensus disorder prediction 52 92 - -
Aed10g1252 363 ProSiteProfiles dnaJ domain profile. 113 177 IPR001623 -
Aed10g1252 363 PANTHER - 1 361 - -
Aed10g1252 363 PRINTS DnaJ domain signature 133 148 IPR001623 -
Aed10g1252 363 PRINTS DnaJ domain signature 115 133 IPR001623 -
Aed10g1252 363 PRINTS DnaJ domain signature 149 169 IPR001623 -
Aed10g1252 363 Pfam Domain of unknown function (DUF1977) 272 343 IPR015399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1252 Aed-Chr10 12776355 12777446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1252 108 174 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.845 8.59e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1252 K09518 - gmx:100793797 595.504