Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1235 ATGTCCACGACCATGATTGACGAATCCTCCGACAACGACAGCACCCGCTCCTCCTCCCTAACCCTAGCCGACTCCACCCGGAGCTGGCTCAGCACCTTCAGCTTCCGCCGCAGCAGCAGCACCACCAGCTCCCTCTCCTTCCGCGCCGCCCCCGACACCACCACCACCACCAACGCTGCATGGGAAGCCATACGTCGCCTCCGCCTCGACACCACCGCCCTGGGCCTAAACCTCAGCCTTGACCACTTCCGCCTCCTGCGACGGCTCGGCAGTGGCGACATAGGGAACGTGTATCTCTGCCATATAGCGGGGCTGCCTCAGTGCCTCTATGCCATGAAGATTCTGGCAATGATGGATCACCCCTTCTTGCCCACTCTGTACGCCGCGTTTGATGCCTCTCATTACTCTTGCCTTGTCATGGACTTCTGCCCCGGTGGCGACTTGTTCTCTGCCCGCCAACGTCAGCCAGGGAAGCGCTTCACCATCTCATCCACTAAGTTTTATGCAGCAGAGACACTAGTGGCTTTGGAGTATCTCCACATGAAGGGCATTGTGTACAGAGATTTGAAGCCAGAGAATGTGCTTGTGAGGGAGGACGGGCACATCATGCTTTCGGATTTCGATCTCTGCCTCAAATGCGACGTCGTTCCGAAGCTTCTGAGAAGCAAAACCAGATCAGAAAGTAGTGCCAAAACCACATCATCATGTGCTGCAGCACCCATGCAGTCATGCTTCTCTGCCTCAAGCAAGAGCAAAAAAGTGGTGACAATAAGGGAAAACGTGGAAGTGTGTGAAGAACACGAACATGATCACACTGAGATGGTGGCAGAGCCCATCAATGCAAAGTCAAAGTCATTTGTGGGGACCCATGAGTACTTGGCACCAGAAGTGATTTCAGGAAATGGGCATGGGAGTGCAGTGGATTGGTGGACTTATGGTGTGTTCTTGTACGAGATGTTGTATGGAAGAACACCCTTCAAGGGTGAGAGCAATGAGAAAACCCTAATCAACATTCTCAAGAAGCCCTTAGCTTTTCCAAGGGTTTCAGCACTGAGTAGTAGTAGTAGTTCTAGCAAGGAAAAGTTTGAAGAAATTGTGAAGGTTCAAGACCTCATTGGAAAGCTTCTTGTGAAGAACCCAAGGAAGAGAATTGGGTGCTGCATGGGCTCAGTTGAGATCAAGAGGCATGAGTTCTTCAAAGGGGTGAATTGGGCTCTAATTAGATCTGTTAGGCCACCTGAGGTACCTGCTGATCATGATCTTATGAACAAGATTAGGAGTAGTAGAGTTTTGTTGAAGAAACTAAGCAAGAAATTTGACAAGGATCAACCTTATCAGATTAATACTCATCATCATTTTGATTACTTTTAA 1371 0.5004 MSTTMIDESSDNDSTRSSSLTLADSTRSWLSTFSFRRSSSTTSSLSFRAAPDTTTTTNAAWEAIRRLRLDTTALGLNLSLDHFRLLRRLGSGDIGNVYLCHIAGLPQCLYAMKILAMMDHPFLPTLYAAFDASHYSCLVMDFCPGGDLFSARQRQPGKRFTISSTKFYAAETLVALEYLHMKGIVYRDLKPENVLVREDGHIMLSDFDLCLKCDVVPKLLRSKTRSESSAKTTSSCAAAPMQSCFSASSKSKKVVTIRENVEVCEEHEHDHTEMVAEPINAKSKSFVGTHEYLAPEVISGNGHGSAVDWWTYGVFLYEMLYGRTPFKGESNEKTLINILKKPLAFPRVSALSSSSSSSKEKFEEIVKVQDLIGKLLVKNPRKRIGCCMGSVEIKRHEFFKGVNWALIRSVRPPEVPADHDLMNKIRSSRVLLKKLSKKFDKDQPYQINTHHHFDYF 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1235 456 PANTHER FLIPPASE KINASE 1-RELATED 2 456 - -
Aed10g1235 456 SMART serkin_6 83 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1235 456 Gene3D Phosphorylase Kinase; domain 1 75 115 - -
Aed10g1235 456 SUPERFAMILY Protein kinase-like (PK-like) 72 416 IPR011009 -
Aed10g1235 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Aed10g1235 456 Pfam Protein kinase domain 282 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1235 456 Pfam Protein kinase domain 112 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1235 456 Gene3D Transferase(Phosphotransferase) domain 1 281 417 - -
Aed10g1235 456 Gene3D Transferase(Phosphotransferase) domain 1 147 214 - -
Aed10g1235 456 Gene3D Phosphorylase Kinase; domain 1 116 146 - -
Aed10g1235 456 PANTHER PROTEIN KINASE PINOID 2 2 456 - -
Aed10g1235 456 ProSiteProfiles Protein kinase domain profile. 83 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1235 Aed-Chr10 12399530 12402374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1235 11 456 AGC Kinase Gene Family AT2G26700 50.664 3.57e-167 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aed10g1235 Pkinase 3.9e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1235 K08286 - gmx:100787216 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1744 6 21042214 21044308 Aed10g1235 10 12399530 12402374 PCT