Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1229 ATGGGAACCTCTGCGAACGCAGTCGCAGGTGGTCGTGGCGGCGCCCCTGTCCCCAAAGACGTTGACTACGCTAATTATTTCTGCACCTATGCTTTCCTCTACCACCAGAAGGAGATGCTCTCCGATCGCGTTCGCATGGACGCTTACTTCAACGCCATTTTTCAAAACAAACAACGCCACTTCGCTGGCAAGAAGACTGTTTTGGATGTGGGGGCTGGAAGTGGAATTCTTGCTATATGGTCGGCACAGGCAGGGGCGAGGAAGGTGTATGCAGTGGAAGCTACCAAGATGTCGGAACATGCACTTGATGTGATCATCTCTGAGTGGATGGGTTATTTTCTTCTTCGTGAATCTATGTTTGATTCAGTTATTCATGCTCGTGACCGCTGGCTCAAACCAACAGGAGTGATGTATCCTAGTCATGCTCGCATGTGGATGGCACCTATCAGGACTGGGATAGTAGATCACAAATTGGGTGATTACGAGTCAACTATGGATGATTGGCACCACTTTGTTGATGAAACTAAAGCATACTATGGTGTTGATATGAGCACTTTAACGAAGCCCTTTTCAGAAGAGCAGAAGAAATACTATCTACAGGCAAGTTGTATACTTGGGTGCACCTTAAGTGTAATGACATCATTGTGGAACAACATTCATCCACATCAAGTTGTAGGAACTGCTGCCATAATAAAGGAAATTGATTGTTTAACTGCCACAGTGGCTGACATAGAGAAAGTTAGTTCAAATTTTTCTATGTCAATAGCCATGGAAAACACAAAATTATGTGGATTTGGAGGGTGGTTTGATGTACATTTTCGGGGAAGAAGCGAGGATCCAGCTGAACACGAGATTGAGTTAACTACAGCTCCCAGTGTAAATAACGGTACACACTGGGGCCAACAGGTTTTCCTCTTGCATCCTCCCATGCGTCTGGGTGAAGGTGATGATTTAAAGGTTTCTTTTCTAATGAGTCGCTCAAAGGAAAACCATCGTTTGATGGAGGTTGATCTTGGATGTGAGATTCAACAGCATTCTGGCAAGCTACTTGCACCTTTCAAAAACAAGTACTACATTGAGTAA 1083 0.446 MGTSANAVAGGRGGAPVPKDVDYANYFCTYAFLYHQKEMLSDRVRMDAYFNAIFQNKQRHFAGKKTVLDVGAGSGILAIWSAQAGARKVYAVEATKMSEHALDVIISEWMGYFLLRESMFDSVIHARDRWLKPTGVMYPSHARMWMAPIRTGIVDHKLGDYESTMDDWHHFVDETKAYYGVDMSTLTKPFSEEQKKYYLQASCILGCTLSVMTSLWNNIHPHQVVGTAAIIKEIDCLTATVADIEKVSSNFSMSIAMENTKLCGFGGWFDVHFRGRSEDPAEHEIELTTAPSVNNGTHWGQQVFLLHPPMRLGEGDDLKVSFLMSRSKENHRLMEVDLGCEIQQHSGKLLAPFKNKYYIE 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1229 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 30 344 IPR029063 -
Aed10g1229 360 Gene3D Vaccinia Virus protein VP39 22 100 IPR029063 -
Aed10g1229 360 Gene3D Vaccinia Virus protein VP39 101 139 IPR029063 -
Aed10g1229 360 Pfam Ribosomal protein L11 methyltransferase (PrmA) 60 97 - -
Aed10g1229 360 Gene3D - 141 360 - -
Aed10g1229 360 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 103 337 IPR025799 GO:0016274|GO:0018216
Aed10g1229 360 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE PRMT10 10 101 - -
Aed10g1229 360 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 102 349 IPR025799 GO:0016274|GO:0018216
Aed10g1229 360 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 10 101 IPR025799 GO:0016274|GO:0018216
Aed10g1229 360 CDD AdoMet_MTases 66 104 - -
Aed10g1229 360 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE PRMT10 102 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1229 Aed-Chr10 12274871 12281958 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1229 25 313 C2H2 Transcription Factor Family AT3G12270 27.628 2.12e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1229 K11434 - gmx:100795134 644.039