Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1227 ATGACTCTGCTACTCTTTCACAAGGTTGTGGTCTCGCTGTGGTGGAGACCGAGGAGAATCGAGTGCCATTTCGCGAAGCAAGGAATCAGAGGACCCCCTTATCGGTTCTTCATTGGGAATGTGAAGGAGCTTGTGGGGTTGATGGTGAAGGCTTCGTCTCAACCCATGGTGCCTCCTTTTTCTCACAACATTCTCCCCAGAGTCCTCTCTTTCTACCACCATTGGAAGAAAATTTACGGTGCAACATTCCTTGTTTGGTTTGGACCCACTGTTCGAGTAACGATCTCTGATCCAGAGCTCATCAGAGAAATCTTCACCTCATCAAAGTCAGAATTCTATGAGAAAAACGAATCTCCCCCACTTGTGAAGCAGCTTGAAGGTGATGGACTCCTTAGCCTCAAAGGAGAAAAATGGGCTTACCACAGAAGAATCATCTCTCCCACATTTCATATGGAAAATCTCAAAATGTTGATACCGAATATGGCAACAAGCGTGGTAGAGATGTTGGAGAAGTGGAAGGCAATGGCCGAGGAGAATAAGGAGGGTGAGGTGGAAATCGAAGTTTCGGAGTGTTTTCAAACATTAACCGAAGATGTCATTACTAGGACAGCGTTTGGAAGCAGCTACGAAGACGGAAAAGCCGTTTTCCGGTTACAAGCCCAACAAATGCTCCTAGCAGCTGATGCCTTCCAAAAAGTGTTCATTCCAGGTTATAGATTCTTCCCCACGAGGAGGAACATAAATTCTTGGAAATTGGACAGGCAAATCAAGAAATCGTTGGTGAAGCTCATCGATAGACGAAAAGCGAATGCGTGTGGGAATGAAGAAGAAGTTGAAGAAACGAAAGGGCCAAAGGATCTTCTGGGGCTTATGATTCGTGCTAAGAACAACAACACCTCCAATGTGAACGTGACGGTGGATGACATCGTGGAAGAGTGCAAGACCTTTTTCTTCGCAGGCAAACACACCACTTCAAACTTGCTGACGTGGACCACGGTCCTGCTCGCCATGCATCCGCAGTGGCAGCTTCGGGCACGTGAGGAGCTCCTGAGCATGATCGTGAACGAGTCCCTGAGACTCTACCCTCCGACCATCGCGACCATACGAAGGACGAAAGCCGACGTGGATCTCGGGGCGTACAACATCCCGAGCGGGACGGAGCTCCTGATCCCGATCCTGGCCGTGCACCACGACCAGGCCACGTGGGGCAGCGACGCCGCCGAGTTCAACCCCAGCCGCTTCTCCAACGGCGTGTCCCGCGCCGCGCACCACCCTTTTGCCTTCATCCCCTTCGGCCTCGGCGCGCACACCTGCGTCGGCCGCAACCTCGCGCTCCTCCAAACCAAGCTCTCCCTCGCGCTCATCCTCCACCGTTTCACCTTCACCTTGGCACCTACCTATCGCCACGCGCCAACGGTTCTCATGCTGCTCTACCCTCAGTACGGTGCACCACTCCTCTTCCAACCATTACCCGCAATCGCAACCGCAACAACTACCGTGGATTATTAA 1509 0.5182 MTLLLFHKVVVSLWWRPRRIECHFAKQGIRGPPYRFFIGNVKELVGLMVKASSQPMVPPFSHNILPRVLSFYHHWKKIYGATFLVWFGPTVRVTISDPELIREIFTSSKSEFYEKNESPPLVKQLEGDGLLSLKGEKWAYHRRIISPTFHMENLKMLIPNMATSVVEMLEKWKAMAEENKEGEVEIEVSECFQTLTEDVITRTAFGSSYEDGKAVFRLQAQQMLLAADAFQKVFIPGYRFFPTRRNINSWKLDRQIKKSLVKLIDRRKANACGNEEEVEETKGPKDLLGLMIRAKNNNTSNVNVTVDDIVEECKTFFFAGKHTTSNLLTWTTVLLAMHPQWQLRAREELLSMIVNESLRLYPPTIATIRRTKADVDLGAYNIPSGTELLIPILAVHHDQATWGSDAAEFNPSRFSNGVSRAAHHPFAFIPFGLGAHTCVGRNLALLQTKLSLALILHRFTFTLAPTYRHAPTVLMLLYPQYGAPLLFQPLPAIATATTTVDY 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1227 502 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1227 502 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1227 502 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1227 502 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1227 502 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1227 502 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1227 502 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1227 502 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1227 502 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1227 502 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1227 502 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1227 502 Pfam Cytochrome P450 69 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1227 502 PANTHER CYTOCHROMEA2 5 485 - -
Aed10g1227 502 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 485 - -
Aed10g1227 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Aed10g1227 502 SUPERFAMILY Cytochrome P450 28 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed10g1227 502 Gene3D Cytochrome P450 15 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1227 Aed-Chr10 12256672 12262766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1227 13 490 Cytochrome P450 AT2G26710 70.884 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1227 K15639 - gmx:100786200 809.29