Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1221 ATGAGGCTCGAGCAACAATTGGAAGAGCAAGCTGCAAGACTTAAGGCGGAGGAAAATGCAAAGTTAGCTCAAATGAGATCAGATGATGAAATCCAAAAACTCAGTGTGAAATCGAGAAGTCTTGGGGGGCTGTCGGCCAGCAAATGCAATTCAGCTACTCCTCTCATCCCCGTGCCCCCTAAATCTCTCATTTTCTTACACGAATGGTGGCTTGTCAAGCAATGCAAGGGTTTAGCCATTGGCGGGGTTGCTTCTGTCGAGAGAGATAGAGAAAGAGTGTTTTTGTCTACTGTGATTGCAGAGAGAGAAGAGGCCAATGTCCTCCACTCTGAAGATGGCATCACTATTCTTTTCCGTGGTTTCATCAACACCTCTCGTTCATCTCAAAATGGCGTCCCCTTAGAGGTATGTCAACACTTCCTTGTTGGATTTCCACATGATTGGAAAAAGTATTCAGCTCATAGTTTTGGAGATGAAGATGATGGTGATGGGGTTACTTCTTTTGGTTACTCAAGTGCTTCTTCAAAGAAAAGGGATGATGATGCTTTGCCATTTTCTATTAGCGACAATGATTTCACCAAGAGACAGGATTCTATATTTGATTCAAACACGTATACATGCCCTTATGGAAAAAGCACGGTTAAACCTCCAACTTCTACAAATAAAATGAAAAGAAAACAATTCTCAGGTGACCGCAAGGAGAAGCAATGGATGAGACAAAAGACAGTATCAGATGCCGGCAATTCCTGTAATAGGATGGTAACGAGAAGCATTTCCAAAAAGAGTCACACAGTGCTTAAAGAATATGAGAAAGCTACAATAACCAGTGCTGTTTCTCCAGTGAGGAGATCTGCTAGGCTACATAGTCGTAGATAA 876 0.4235 MRLEQQLEEQAARLKAEENAKLAQMRSDDEIQKLSVKSRSLGGLSASKCNSATPLIPVPPKSLIFLHEWWLVKQCKGLAIGGVASVERDRERVFLSTVIAEREEANVLHSEDGITILFRGFINTSRSSQNGVPLEVCQHFLVGFPHDWKKYSAHSFGDEDDGDGVTSFGYSSASSKKRDDDALPFSISDNDFTKRQDSIFDSNTYTCPYGKSTVKPPTSTNKMKRKQFSGDRKEKQWMRQKTVSDAGNSCNRMVTRSISKKSHTVLKEYEKATITSAVSPVRRSARLHSRR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1221 291 MobiDBLite consensus disorder prediction 225 240 - -
Aed10g1221 291 PANTHER TRANSCRIPTION REGULATOR OTHERS FAMILY-RELATED 188 291 - -
Aed10g1221 291 PANTHER TRANSCRIPTION REGULATOR OTHERS FAMILY-RELATED 46 181 - -
Aed10g1221 291 Pfam SANTA (SANT Associated) 64 151 IPR015216 -
Aed10g1221 291 PANTHER MIS18-BINDING PROTEIN 1 46 181 IPR039110 -
Aed10g1221 291 PANTHER MIS18-BINDING PROTEIN 1 188 291 IPR039110 -
Aed10g1221 291 MobiDBLite consensus disorder prediction 211 241 - -
Aed10g1221 291 Coils Coil 4 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1221 Aed-Chr10 12022184 12034191 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed10g1221 SANTA 1.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1221 - - gmx:102668053 298.901