Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1206 ATGGCACTCCACATTCCCCTCCACGTGGCGGCAACCACCATGATGCTCGTCTTCGTCTCCATCGCTCTTGTTCAGCCGAGTGAGCGAGTCAACGCGGAGCCGACTCAGGACAGGCAAGCCCTCCTCGCGTTCATCTCCCTCACCCCGCACGCGAACCGGGTCCAGTGGAACACCTCCGGCTCGGCCTGTGACTGGTTCGGCGTCGAATGCGACTCCAACCGCTCCTCCGTCCGCTCTCTCCGCCTCCCGGCCGCCGGCCTCGTGGGCCCCATCGCCGCCAACACAATCGGCCGCCTCACGCAGCTTCGCGTCCTCAGCCTCCGCTCCAACGCCCTCGCGGGCCCCATCCCCGCCGATTTCGCCAACCTCACCTTCCTCCGCAACCTCTACCTCCAGAACAACCACCTCTCCGGCGAGTTCCCGGCAGCCCTAACCCGCTTGACTCGCTTGACTCGCCTCGAACTCAGCTCCAACAACTTCAGCGGCGAAATCCCTTTCTCCCTCAACAATCTCACTCACTTAACAGGTCTCTTTCTAGAAAACAACTCCTTCTCAGGTAACCTCCCCAGCATTACGCTAAAACTAACAAACTTCAACGTTTCAAATAACCTACTAAACGGCTCAATCCCCAACGCTCTCTCACATTTCCCAACGACGTCGTTTTCCGGAAACAACGACCTCTGCGGGAAACCATTGCAGCCCTGCACGCCATTCTTCCCGGCACCGGCTCCTTCACCGGATGTTGTTCCACCTCATCATCGCTCCAAGAAGAAGCTCTCCACAGCCGCCGTAATTGGAATCTCCGTCGGATCCGCTCTACTTGCATTGTTGTTACTTCTTTGTATTCTGTTTACATGCTGCCGGCGGAGGAGGCGGTCGGCGAAAGCCCCGCAAGGTGTAGCATCGGCGGCGGCGGCGGCGCGTGGAGGAACAACCGAGGGTGGAACGTCGTCGTCGAAGGACGACATCACCGGAGGATCGTTGGAGGCTGTGGAGAAGAACAAGCTGGTGTTCATGGAGGGCGGGGTGTACGGGTTCGGGTTGGAGGATTTGCTGAGGGCTTCGGCGGAGGTGTTGGGAAAGGGTAGTATGGGAACTTCCTATAAGGCAATTTTGGAGGACGGAACCACGGTCGTTGTTAAGCGATTGAAGGATGTGGCGGTTACTAAGAGAGAATTCGAAGCGCAAATGGAGATTGTTGGGAACATTAAGCACGACAATGTGCTTCCCCTCAGAGCCTTTTACTTCTCCAAAGATGAGAAATTGCTCGTTTGCGATTACTTGGCCGCCGGCAGCTTGTCTGCACTTCTTCACGGGAGCAGAGGGTCTGGGAGAACGCCACTGGATTGGGACACCAGAATGAAAATAGCACTGGGAGCCGCAAGGGGCCTCGCGTTCCTCCACGTGTCAGGAAAATTGGTCCACGGCAACATCAAATCCTCCAACATACTACTGCAGTCGAGCCACGAGACTTGCATTTCGGACTTCGGGCTCAACCCGGTTTTCGAGAACCCGGTTCCCTCGAACCGGGTCGCGGGTTACCGCGCTCCGGAGGTTCAAGAAACCAAAAAGGTCACTTTCAAGTCCGACGTGTACAGCTTTGGCGTACTGCTGCTGGAGCTTTTGACAGGTAAGGCACCGAACCAAGCCTCACTAAGCGAGGAAGGGATCGACCTACCGCGGTGGGTGCAGTCGGTGGTTCGCGAAGAGTGGACCGCAGAAGTGTTCGACTCCGAACTAATGAGGTACCACAACATCGAAGAAGAGATGGTTCAGTTGTTACAAATTGCAATGACATGCGTTTCGCTCATGCCGGATCAACGGCCCAACATGGACGAGGTGCTGCGCATGATCGAGGACATCAGCCGCAGCAGCGAGACCACCGATGACGGCTTGCGCCAGTCGTCGGATGATCCCTCCAAAGGATCGGACGCTCACACGCCGCCTCAGGACGCCAGGACTCCCCCAAGGTCCGACACGTCGTAG 1986 0.573 MALHIPLHVAATTMMLVFVSIALVQPSERVNAEPTQDRQALLAFISLTPHANRVQWNTSGSACDWFGVECDSNRSSVRSLRLPAAGLVGPIAANTIGRLTQLRVLSLRSNALAGPIPADFANLTFLRNLYLQNNHLSGEFPAALTRLTRLTRLELSSNNFSGEIPFSLNNLTHLTGLFLENNSFSGNLPSITLKLTNFNVSNNLLNGSIPNALSHFPTTSFSGNNDLCGKPLQPCTPFFPAPAPSPDVVPPHHRSKKKLSTAAVIGISVGSALLALLLLLCILFTCCRRRRRSAKAPQGVASAAAAARGGTTEGGTSSSKDDITGGSLEAVEKNKLVFMEGGVYGFGLEDLLRASAEVLGKGSMGTSYKAILEDGTTVVVKRLKDVAVTKREFEAQMEIVGNIKHDNVLPLRAFYFSKDEKLLVCDYLAAGSLSALLHGSRGSGRTPLDWDTRMKIALGAARGLAFLHVSGKLVHGNIKSSNILLQSSHETCISDFGLNPVFENPVPSNRVAGYRAPEVQETKKVTFKSDVYSFGVLLLELLTGKAPNQASLSEEGIDLPRWVQSVVREEWTAEVFDSELMRYHNIEEEMVQLLQIAMTCVSLMPDQRPNMDEVLRMIEDISRSSETTDDGLRQSSDDPSKGSDAHTPPQDARTPPRSDTS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1206 661 Pfam Protein kinase domain 356 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1206 661 CDD STKc_IRAK 359 621 - -
Aed10g1206 661 SUPERFAMILY Protein kinase-like (PK-like) 357 618 IPR011009 -
Aed10g1206 661 Gene3D Ribonuclease Inhibitor 34 192 IPR032675 -
Aed10g1206 661 Pfam Leucine rich repeat N-terminal domain 35 71 IPR013210 -
Aed10g1206 661 SUPERFAMILY L domain-like 35 235 - -
Aed10g1206 661 Gene3D Transferase(Phosphotransferase) domain 1 428 641 - -
Aed10g1206 661 Gene3D Ribonuclease Inhibitor 195 235 IPR032675 -
Aed10g1206 661 PANTHER OS05G0588300 PROTEIN 18 640 - -
Aed10g1206 661 MobiDBLite consensus disorder prediction 620 661 - -
Aed10g1206 661 Gene3D Phosphorylase Kinase; domain 1 326 427 - -
Aed10g1206 661 ProSiteProfiles Protein kinase domain profile. 353 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g1206 661 MobiDBLite consensus disorder prediction 620 640 - -
Aed10g1206 661 PANTHER OS05G0480400 PROTEIN 18 640 - -
Aed10g1206 661 MobiDBLite consensus disorder prediction 298 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1206 Aed-Chr10 11663725 11668774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1206 32 647 Receptor kinase-like Gene Family AT5G58300 54.213 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed10g1206 Pkinase 2.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1206 - - gmx:100784259 1015.76