Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1199 ATGCATGGCTCCAAGGTCAAAATTTATCTCTACAAATTAATGCAGCCATTTCCACATGACCACTTCAGCATCCATCTTCTTCTCATGGCTCTTCTTCCTCCATGGGTCCAAGAGCTCCATCTGCATCACTTGACCATTCCTATAACCATCGACAAGATGCTATCCGTCATGCCATCGAGGCCTACCCCTGTTAAACCAGGCGACAGTTTGTATCTGTCGAACCTCGATGACATGATCGGAGCCCGTGTCTTTACACCGACGGTGTACTTTTATCAATCCGATGAAAGCAAGGGTTTTGGGTTTCCGGTGACGAAAACACTGCAGTGTGCTCTCGCGGATGTTCTGGTGCCGTATTACCCTCTCTCCGGGAGGCTGAGGGAGACGAGGAAGGACAAACTGGAGGTGTTTTTCGGGCCGGATCAAGGAGCGCTCATGGTGGAGGCGCGGTCGGATATGGCGTTGGTGGAATTGGGGGACCTGACAGCTCCGAACCCGGATTGGGAGCCTTTGATCTTCAAGTTTCCGAATGAAGAGCAGTACAAAGTCCTTGAAATGCCGCTGGTGATTGCTCAGGTTACTCTTTTCCGCTGCGGCGGATTCAGCCTCGGCTTGAGGCTGTGCCATTGCATCTGCGACGGCCTTGGAGCCATGCAGTTTCTAGGTGCGTGGGCCGCCACTGCAAGAACAGGGACACTGGTGATCGACCCTGAGCCATGCTGGGACAGGGAGATCTTCGCCCCTCGTGATCCTCCCGAGGTGAAATTCCCCCACATGGAGTTCATGACGATCGAGGAGGGTTCCAACCTCACAATGACGCTATGGGAAACAAAGCCGGTTCAGAAGTGTTACAGAATCAAGCGGGAGTTCCAGAGCCGCGTGAAGGCGCTCGCCCAGCCGTATGACGCGGCGGGCTGCACGACTTTCGATGCAATGGCGGCCCACATCTGGAGGTCGTGGGTGAAGGCGCTGGACGTGAGGCCGCCGGAGTACCAACTCAGGCTGACGTTTTCGGTCAATGCTAGGCAGAAGCTTAGGAACCCTCCTCTGAGAGAAGGGTTCTACGGCAACGTGGTGTGCGTTGCTTGCACGGCAAGTTCCGTCTCGGAGCTTGTCCATGGAGAGCTCCCGGAGACCACTCGCCTCGTTCGTGAGGCGAGGCAGAGCGTCTCCGAGGAGTATCTGCGGTCTACGGTGGATTTCGTTGAAGTGGATAGGCCAAGGCAGCTTGAGTTTGGTGGCAAGTTGACAATAACTCAGTGGACTAGGTTCTCTATTTACAAGTGTGCGGATTTTGGGTGGGGTAGGCCACTCTATGCTGGTCCTATAGACTTAACACCAACACCTCAGGTTTGTGTTTTTCTACCTGAAGGAGAAGCTGATTGTAGCTACGGTGGCTCTATGATTGTGTGCATATGCTTGCCTGAGTCTGCTGCAGTTAAGTTCACACAGGCCCTCTTGCTTGATTCGGTTTCTTGA 1476 0.5386 MHGSKVKIYLYKLMQPFPHDHFSIHLLLMALLPPWVQELHLHHLTIPITIDKMLSVMPSRPTPVKPGDSLYLSNLDDMIGARVFTPTVYFYQSDESKGFGFPVTKTLQCALADVLVPYYPLSGRLRETRKDKLEVFFGPDQGALMVEARSDMALVELGDLTAPNPDWEPLIFKFPNEEQYKVLEMPLVIAQVTLFRCGGFSLGLRLCHCICDGLGAMQFLGAWAATARTGTLVIDPEPCWDREIFAPRDPPEVKFPHMEFMTIEEGSNLTMTLWETKPVQKCYRIKREFQSRVKALAQPYDAAGCTTFDAMAAHIWRSWVKALDVRPPEYQLRLTFSVNARQKLRNPPLREGFYGNVVCVACTASSVSELVHGELPETTRLVREARQSVSEEYLRSTVDFVEVDRPRQLEFGGKLTITQWTRFSIYKCADFGWGRPLYAGPIDLTPTPQVCVFLPEGEADCSYGGSMIVCICLPESAAVKFTQALLLDSVS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1199 491 Gene3D - 268 485 IPR023213 -
Aed10g1199 491 Pfam Transferase family 47 483 - -
Aed10g1199 491 Gene3D - 45 262 IPR023213 -
Aed10g1199 491 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 42 487 - -
Aed10g1199 491 PANTHER F21B7.2 42 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1199 Aed-Chr10 11567520 11568995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1199 48 488 Monolignol Biosynthesis Gene Families AT5G48930 29.956 8.89e-51 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1199 K15400 - gmx:100802814 861.677