Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1187 ATGGACCCGCGACGCGCCTCGCGGGCCTCAGTGACCGACCCCAAAGTAAGGCGCATCGGCTTCTTCGCTCCGCAACCCGAACCCGACCCGACGCCGCCCTCTGAAGCGATTCCTCCGCCGCGTCATCTCTCCGCCGCCGTGCCCGTCCCCAAAACCGGCATCCGGCGCCAGGTGTCCGGCGACCTTGCGCCAATTGGAAGCTACAACCCCGCCGAGTCGCTGCTCGGAACCTCGCCGGCGGCCTCGTCGCCTGCTTCGAGCGCCATTGGCATCGGTGGCGACAAGGAGTTCTCCGAGGACTCCTCCTCCGCCGCCGGCTGGTACCGTCACAGCGACTCGAGTTTTGCTGGCGCAGGGTTTGACTTGCCAGCTGTGAAGCCTCCGCAGAATTCGCCGGCGGTGAATGCGAGAAAACTTGCCGGAGCCAAAGTGGCAAGCAAAAATCCTGCAGAAAAGAGGGAAGAGTCTACCAAAGAAGTACGCCCTGATCTGCCATCAATATCAAAGCCACTAAAAGAAAAAACTACAAAGGCTGAAAGACGAGCCTTGCAGGAGGCACAAAGAGCTGCAAAAGCTTCTTCTAAAGCTGATGGAAACACAGCAGTTGCTGAATCTGGGAGGGCAGCCCCCAGTAAAAGTATGAGACAGTCTTCACAAAAGAAAGATGGTCCTCTTGTTACATCATCAGTGGCTACTGACAAGAAATCAGGAGATCGTTCTTTGGAGAAAGAGAGGAAAAAAGATGTTCCTCCTCCACGAATGCAATTTGATGATAAAAACAGAGTGGAAAAATCAAAAAGGCGTGCAGTAATTGATCAAACTGAAGCTAGAAACAGAGTTGAATTATTTCGCCATTTGCCTCAATATGAACGTGGGACTCAGCTTCCTAAACTTGAATCGAAGTTTTTCCAACTTGATTCAGTGCATCCTGCTGTGTTTAAGGTTGGATTGCGTTACTTGGCAGGAGATATACAAGGGAGTAATGCCCGATGTATTGAAATGCTTAGAGCATTTCAGGAAGCCATTGTAGACTACTCCACACCGCCTGCAAAAGTCCTTGTCAGGGATTTAACTGCAAAAATAAGTAGTTATGTTTCGTTTTTTACGGAATGCAGACCCCTTTCTATTAGCATGGGAAATGCAATTAGGTTTGTAAAGAGTTGTATTGCCAAGTTGCCTTTAAGTCATACTGAATCTGAAGCAAAAGCAGCTCTTTGTTCAGATATTAATCAGTTCATTAATGAAAAAATAATTCTTGCTGACAAGGTGATTGTTGGACATGCTGCTTCGAAGGTTAGGGATGGAGACGTTCTTCTTACATATGGATCATCATGTGTTGTTGAGATGATTCTCTTACATGCTCATGATCTTGGGAAACAGTTCCGTGTTGTGGTGGTAGACTCACGACCAAAGTTTGAAAGCCAGGCCTTACTTCGTAGGCTGCTGGCTAAGGGCTTGAGTTGTACATATACCCATATAAATGCCATTTCTTATGTCATGCATGAGGTCACACGAGTTTTTCTGGGAGCTTCTTCCGTTCTGTGTAATGGAACTGTCTATTCAAGAGTTGGTACTGCATGTGTTGCAATGGTGGCTCATGCTTTTCATGTTCCTGTATTGATCTGTTGTGAAGCTTATAAGTTCCATGAAAGGGTGCAACTTGACTCAATATGTTCTAATGAACTAGGTGACCCAGATGCTGTCGCCACGGTACCTGGAAGAATTGATGTCAATTATCTGGCCAATTGGACTAGTCAAGACAATTTGCAGCTTCTGAATTTGTTCTATGATGCTACTCCTTCAGATTATGTATCGGCCATTGTTACAAATCATGGAATGATTCCCCCTACTAGTGTGCCCGTAATTGTGCGCAAGTATGGACGTGAGCACTTGATCTAG 1899 0.4718 MDPRRASRASVTDPKVRRIGFFAPQPEPDPTPPSEAIPPPRHLSAAVPVPKTGIRRQVSGDLAPIGSYNPAESLLGTSPAASSPASSAIGIGGDKEFSEDSSSAAGWYRHSDSSFAGAGFDLPAVKPPQNSPAVNARKLAGAKVASKNPAEKREESTKEVRPDLPSISKPLKEKTTKAERRALQEAQRAAKASSKADGNTAVAESGRAAPSKSMRQSSQKKDGPLVTSSVATDKKSGDRSLEKERKKDVPPPRMQFDDKNRVEKSKRRAVIDQTEARNRVELFRHLPQYERGTQLPKLESKFFQLDSVHPAVFKVGLRYLAGDIQGSNARCIEMLRAFQEAIVDYSTPPAKVLVRDLTAKISSYVSFFTECRPLSISMGNAIRFVKSCIAKLPLSHTESEAKAALCSDINQFINEKIILADKVIVGHAASKVRDGDVLLTYGSSCVVEMILLHAHDLGKQFRVVVVDSRPKFESQALLRRLLAKGLSCTYTHINAISYVMHEVTRVFLGASSVLCNGTVYSRVGTACVAMVAHAFHVPVLICCEAYKFHERVQLDSICSNELGDPDAVATVPGRIDVNYLANWTSQDNLQLLNLFYDATPSDYVSAIVTNHGMIPPTSVPVIVRKYGREHLI 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1187 632 MobiDBLite consensus disorder prediction 210 234 - -
Aed10g1187 632 Pfam Initiation factor 2 subunit family 324 616 IPR000649 GO:0044237
Aed10g1187 632 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 631 - -
Aed10g1187 632 MobiDBLite consensus disorder prediction 235 268 - -
Aed10g1187 632 Gene3D - 420 626 IPR042529 -
Aed10g1187 632 MobiDBLite consensus disorder prediction 147 186 - -
Aed10g1187 632 MobiDBLite consensus disorder prediction 71 85 - -
Aed10g1187 632 MobiDBLite consensus disorder prediction 25 45 - -
Aed10g1187 632 SUPERFAMILY NagB/RpiA/CoA transferase-like 321 626 IPR037171 -
Aed10g1187 632 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 1 631 - -
Aed10g1187 632 MobiDBLite consensus disorder prediction 1 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1187 Aed-Chr10 11355027 11361754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1187 1 632 Eukaryotic Initiation Factors Gene Family AT5G38640 57.982 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1187 K03680 - gmx:100778711 1037.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1187 10 11355027 11361754 Aed6g1697 6 20637570 20641451 ECH
Aed10g1187 10 11355027 11361754 Aed10g1187 10 11355027 11361754 ECH