Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1170 ATGAGCAATCCTTCAGATGAAAGGGATCGACAGTGTGAAAAGAAGAGAAAATCCACCATAGAAGCCAGCTCCAATTTCAAGACTTCAAGGAGGAGATTCAGCAGCAGCAACAACAACAACAAAAACGATCTTCATCAAGATCAAGGAGCCGTTTCGACGACGCTGAAGCTTTACGACGACCCGTGGAAGATCAAGAAGACGCTAACCGACAGCGATTTGGGGATCCTAAGCAGACTCTTGCTGGCTGGCGATTTGGTGAAGAAGCAAATCCTGCCTATGTTGGGTGCAGATCATGCAAGGGCTGCAGAAACCGAAGAAGGGACTGCGGTTAGAGTTTGGGACATGGACACCAAATCGATGCACCAACTCGTCCTTAAGCGTTGGTCTTCTTCCAAAAGCTATGTTCTTATTGGAAAGTGGAACCAAGACTTTGTGAGGAGAAGAGACCTCAAGAAAGGTGATGAGATTGGGTTCCATTGGGATCCTTATAACTTTGTTTTTAATTACTGTGTTCTTAAACGAGCTATGCCAGAGATAACTAATTGA 546 0.4505 MSNPSDERDRQCEKKRKSTIEASSNFKTSRRRFSSSNNNNKNDLHQDQGAVSTTLKLYDDPWKIKKTLTDSDLGILSRLLLAGDLVKKQILPMLGADHARAAETEEGTAVRVWDMDTKSMHQLVLKRWSSSKSYVLIGKWNQDFVRRRDLKKGDEIGFHWDPYNFVFNYCVLKRAMPEITN 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1170 181 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 11 174 - -
Aed10g1170 181 MobiDBLite consensus disorder prediction 1 47 - -
Aed10g1170 181 CDD B3_DNA 62 173 IPR003340 GO:0003677
Aed10g1170 181 Gene3D - 61 175 IPR015300 -
Aed10g1170 181 MobiDBLite consensus disorder prediction 1 21 - -
Aed10g1170 181 SUPERFAMILY DNA-binding pseudobarrel domain 60 173 IPR015300 -
Aed10g1170 181 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 11 174 - -
Aed10g1170 181 MobiDBLite consensus disorder prediction 22 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1170 Aed-Chr10 11048396 11048941 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1170 64 159 RAV Transcription Factor Family AT1G50680 34.951 1.16e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1170 - - gmx:102667341 279.641