Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1164 ATGAGGCTAACAGACATTAATTATGCTACCTTAACACAGCAACATCATCGTAGCTATCTTTCTCCAACCCATGTGGATTCATCTCAAGTGTTAAACTCTATTCCCTTCTCCTACTCCAAATTGCACCATTTCAACAACACCATCAACAGTCCAAACACTTCATCAAACAGCAATAACAACAACGACAACAATGTTGGCGAAGCAAATGCTCTCCTTGAAGATCGAAACCAGAAGAGGGTGTTCTCGAACAGAGAATCTGCTCACAGGTCACGCACGTGGAAAAAGCAACAAATTGAGTCCCTTCAGTGTAACCAAGATAATCTTCAGACACTGAATCGCCAACTCTCGGAGAAGATCATTTACATGCTGGAATGCAACCAGCAAATCCTCGAACACAATGCACAACTCAAAGACAAGGTTTCTTCTCTTCAAGTTGCACTCTCTGAGTTGCTCGGTCCTCTGGAACATGTTGATCAGCACCACCACCACTTCCACACTGGCCTTGTACCCGAGCCTTCTTCAGCAACGGTATTCCACCAATTGCTAGCTGGAGCATAG 558 0.4444 MRLTDINYATLTQQHHRSYLSPTHVDSSQVLNSIPFSYSKLHHFNNTINSPNTSSNSNNNNDNNVGEANALLEDRNQKRVFSNRESAHRSRTWKKQQIESLQCNQDNLQTLNRQLSEKIIYMLECNQQILEHNAQLKDKVSSLQVALSELLGPLEHVDQHHHHFHTGLVPEPSSATVFHQLLAGA 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1164 185 Pfam bZIP transcription factor 73 128 IPR004827 GO:0003700|GO:0006355
Aed10g1164 185 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 16 174 IPR044521 -
Aed10g1164 185 SMART brlzneu 71 135 IPR004827 GO:0003700|GO:0006355
Aed10g1164 185 Coils Coil 98 118 - -
Aed10g1164 185 MobiDBLite consensus disorder prediction 47 66 - -
Aed10g1164 185 PANTHER BASIC LEUCINE-ZIPPER 70-RELATED 16 174 - -
Aed10g1164 185 SUPERFAMILY Leucine zipper domain 75 126 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1164 Aed-Chr10 10990924 10991481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1164 73 158 bZIP Transcription Factor Family AT5G60830 50.000 3.55e-21 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed10g1164 bZIP_1 1e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1164 - - pvu:PHAVU_009G204300g 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1164 10 10990924 10991481 Aed6g1663 6 20451660 20452235 PCT