Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1151 ATGGCCATGAAAAGAAAGCTATGGAAAGAATTCTTGAACGGTATGAGAGGTATTCATATGCAGAGAGGCAGCTTGTTGCAAGTGATCAACCACAAACTGAATTTTATGGGACAAGATTTGGAAGGCCTTAGTATCAAAGAGCTTCAGAATTTGGAGCATCAGCTTGATACTGCTCTCAAACACATTAGATCAAAGAAGAATCAACTCATGTATGAATCTATTTCAGAGCTTCATAAAAAGGATAAGGCCCTGCAGGAACAAAACAACACTCTCTCTAAGAAGATAAAGGAGAAAGAGAAGGCACTAGCTCAACATGCACAACTGGAGCAACGTGGTGAAGAAATGGATCTTAGTTCCTCTGCCCTTCTACCTCAACCATTGGATACATCAAACATCATTAGAGGCTGCTCACTAATTATTAGAGATGAAGGAGATAATGAAGAAACCCCAACTCCAACCCGAGCTAATAATGCCATTCTTCCACCTTGGATGCTTCGTCCTTCAAATGAATAG 513 0.4035 MAMKRKLWKEFLNGMRGIHMQRGSLLQVINHKLNFMGQDLEGLSIKELQNLEHQLDTALKHIRSKKNQLMYESISELHKKDKALQEQNNTLSKKIKEKEKALAQHAQLEQRGEEMDLSSSALLPQPLDTSNIIRGCSLIIRDEGDNEETPTPTRANNAILPPWMLRPSNE 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1151 170 PANTHER SERUM RESPONSE FACTOR HOMOLOG 32 132 - -
Aed10g1151 170 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL8 HOMOLOG 32 132 - -
Aed10g1151 170 ProSiteProfiles K-box domain profile. 9 101 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aed10g1151 170 Coils Coil 74 111 - -
Aed10g1151 170 MobiDBLite consensus disorder prediction 143 170 - -
Aed10g1151 170 Pfam K-box region 31 95 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aed10g1151 170 Coils Coil 48 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1151 Aed-Chr10 10763980 10772132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1151 31 168 MADS-box Gene Family AT5G60910 53.957 5.41e-37 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1151 K09264 K09260 gmx:100816836 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1151 10 10763980 10772132 Aed6g1649 6 20358159 20363267 ECH
Aed3g0256 3 1895097 1898060 Aed10g1151 10 10763980 10772132 ECH
Aed3g0997 3 7511890 7518155 Aed10g1151 10 10763980 10772132 ECH
Aed10g1151 10 10763980 10772132 Aed10g1151 10 10763980 10772132 ECH