Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1147 ATGGTTTTGTTGCTCATGGATTCATTCCATGTTGTGTTTGTAGAATCATTTGATCCATTGGATCCAACTGGGAACGTGACAATAAGATGGGATATCATGTCCTGGACATCAGATGGTTATTTGGCCACAGTGACATTGTTTAACTTCCAACTATACCGCAACATTATGAATCCTGGGTGGACACTAGGATGGACATGGGCAAAGAAGGAAATAATATGGGCCATGATGGGAGCTCAAGCCACAGAACAAGGAAACTGTGCCAAGTTCAAGTTGAAGATTCCTCACAGCTGCATGAGGAACCCTCAAGTGGTTGATTTGCTACCCGGAGCTTCTTTCAACATGCAGTTCACCAACTGCTGCAGGGGTGGTGTGCTTTCATCTTGGGGCCAGAACCCTTCTGGTGCTGTCTCAGCATTTCAGATAGGTGTTGGCCTCTCTGGCACCTCCAACAAGACTGTCAAATTGCCTAAGAACTTCAAATTGCTTGGACCTGGACCAGGATACTCATTGTCCTGGAATGTGACATGCACTTACTCACAGTTTCTTGCCTCCAAGAATCCAAGCTGCTGTGTTTCTTTGTCATCTTTCTACAGTGACAAAGTCACAGGTTGCCCACCTTGTGCTTGTGGCTGCCAGAATAACGATACCTGTGTCACGAAAGATTCAAAGATCCTGCAAGAGAATGTCACCTCGCCTCACCGAAACTCAGACATCTCACTCACACCAAAACCATTGTTACAATGCACACACCACCTGTGTCATGTCAGGGTGCACTGGCATTTGAAAGACAACTACAAGGACTATTGGCGTGTCAAGATTGCCATCATCAACTTCAACTATCGGTTGAATTTCACCGATTGGTCTCTCGTTGTGCAGCACCCCAATCTCAACAATGTCACCCAAGTCTATAGCTTTGAATACATGCCACTCCTTCCCTATGAATCCATAAATGACACAGGCATGTTCTATGGTTTGAAGTATTACAATGATTTGTTGATGGAAGCTGGCTCTAAAGGGAATGTGCAATCTGAGGTGCTCATGAAGAAGGACAAGAACACATTTACTCTCAAGCAGGGATGGGCATTTCCTAGGAGAGTCTACTTCAATGGTGATGAATGTATGCTGCCACCTCCTGATTCATATCCTATGTTGCCAAACTCTGGCCATAAACTACCAACTACTATTACATTGATAGCAGCCTATGTGGTTTTTACATTGTTTTTTCACTTGGATGTAACATTTTTTTGA 1248 0.4415 MVLLLMDSFHVVFVESFDPLDPTGNVTIRWDIMSWTSDGYLATVTLFNFQLYRNIMNPGWTLGWTWAKKEIIWAMMGAQATEQGNCAKFKLKIPHSCMRNPQVVDLLPGASFNMQFTNCCRGGVLSSWGQNPSGAVSAFQIGVGLSGTSNKTVKLPKNFKLLGPGPGYSLSWNVTCTYSQFLASKNPSCCVSLSSFYSDKVTGCPPCACGCQNNDTCVTKDSKILQENVTSPHRNSDISLTPKPLLQCTHHLCHVRVHWHLKDNYKDYWRVKIAIINFNYRLNFTDWSLVVQHPNLNNVTQVYSFEYMPLLPYESINDTGMFYGLKYYNDLLMEAGSKGNVQSEVLMKKDKNTFTLKQGWAFPRRVYFNGDECMLPPPDSYPMLPNSGHKLPTTITLIAAYVVFTLFFHLDVTFF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1147 415 PANTHER PROTEIN COBRA 170 415 IPR006918 GO:0010215|GO:0031225
Aed10g1147 415 PANTHER PROTEIN COBRA 10 169 IPR006918 GO:0010215|GO:0031225
Aed10g1147 415 PANTHER COBRA-LIKE PROTEIN 170 415 - -
Aed10g1147 415 PANTHER COBRA-LIKE PROTEIN 10 169 - -
Aed10g1147 415 PIRSF COBRA 169 413 IPR006918 GO:0010215|GO:0031225
Aed10g1147 415 PIRSF COBRA 1 171 IPR006918 GO:0010215|GO:0031225
Aed10g1147 415 Pfam COBRA-like protein 40 187 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1147 Aed-Chr10 10696412 10698789 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1147 2 409 COBRA Gene Family AT3G02210 54.023 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1147 - - gmx:100813134 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1147 10 10696412 10698789 Aed10g1147 10 10696412 10698789 ECH