Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1146 ATGTTCAACTTTCAACAATATCGCCACATTCAGGCGCCCGGATGGTCATTAGGGTGGACATGGGCTAAAAAGGAGGTGATTTGGAACATGATGGGAGCACAAACCACAGAGCAAGGGGACTGTTCAAAGTTCAAAGCCGGCATTCCACATTGTTGCAAGAAGGATCCATTAGTGGTGGATTTACTTCCAGGGACTCCTTACAACCAGCAGATTGCAAATTGCTGCAAAGGGGGTGTCCTGAATTCATGGGGTCAGGACTCCAGCACTGCTGTGAGTTCTTTCCAGATCAGTGTTGGTTCTGCCGGAACGACAAACAAAACGGTCAAAATGCCTAAGAATTTCACCCTCAAAGCACCAGGACCTGGCTATACTTGTGGTCCTGCCAAAATTGTGAAACCAACTACATTTATTACCAGTGACAAGAGAAGAATCACCCAAGCATTGAGTAATCCAAAATCCCCACATTTAGCTACGGTTGTATCATCATCATCAGGCAAAGCTGCTGCAAACACACCACTAGTCCAGTGTACCAGCCATATGTGTCCCGTTCGAGTGCATTGGCACGTGAAGCTCAACTACAAAGAGTACTGGAGGGTCAAGATCACAATCACAAATTTCAATTACAGAATGAATTACTCACTATGGAACCTTGTTGTGCAGCATCCCAATCTAGATAACATTACACAGCTCTTCAGTTTCAATTACAAGTCACTGACACCCTATGAGGGCTTGAATGACACAAGTATGCTGTGGGGAGTCAAGTTCTACAATGATTTCCTTTCTACAGCCGGACCTCTCGGTAATGTTCAGTCAGAAATCTTACTTAGAAAAGACAAATCAACCTTCACATTTGATAAGGGATGGGCCTTCCCTAGAAGGATTTACTTCAATGGGGATAACTGTGTTATGCCTCCTCCAGATGCATACCCTTGGCAGCCAAATGCAAGTTCTAAACTAGTTTTCTCTTTACTAAGTACAGTCTTAGCCACTTTAGCTTCTTTGTTAATGTTATTGAGTCAATCATAG 1026 0.4366 MFNFQQYRHIQAPGWSLGWTWAKKEVIWNMMGAQTTEQGDCSKFKAGIPHCCKKDPLVVDLLPGTPYNQQIANCCKGGVLNSWGQDSSTAVSSFQISVGSAGTTNKTVKMPKNFTLKAPGPGYTCGPAKIVKPTTFITSDKRRITQALSNPKSPHLATVVSSSSGKAAANTPLVQCTSHMCPVRVHWHVKLNYKEYWRVKITITNFNYRMNYSLWNLVVQHPNLDNITQLFSFNYKSLTPYEGLNDTSMLWGVKFYNDFLSTAGPLGNVQSEILLRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWQPNASSKLVFSLLSTVLATLASLLMLLSQS 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1146 341 PIRSF COBRA 1 150 IPR006918 GO:0010215|GO:0031225
Aed10g1146 341 PIRSF COBRA 146 341 IPR006918 GO:0010215|GO:0031225
Aed10g1146 341 PANTHER COBRA-LIKE PROTEIN 151 339 - -
Aed10g1146 341 PANTHER COBRA-LIKE PROTEIN 1 148 - -
Aed10g1146 341 Pfam COBRA-like protein 1 149 IPR006918 GO:0010215|GO:0031225
Aed10g1146 341 PANTHER PROTEIN COBRA 151 339 IPR006918 GO:0010215|GO:0031225
Aed10g1146 341 PANTHER PROTEIN COBRA 1 148 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1146 Aed-Chr10 10693584 10696053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1146 1 325 COBRA Gene Family AT5G60920 68.435 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1146 - - gmx:100815779 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1146 10 10693584 10696053 Aed10g1146 10 10693584 10696053 ECH