Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1122 ATGGCTATGGCTGCTGCTCTGCGTCGCGAAGGGAGGCGTCTGACCCAACCAATCAACGCCCTCAATTCCTCTCTCATCTCTCAAGACCAAGCCCCTCATGGCACTCGCTCCATTTCCACTCAAATTGTTAGGAACCGAATGAAGAGTGTGAGGAATATCCAGAAGATCACCAAGGCCATGAAGATGGTTGCCGCGTCCAAGCTGCGAGCCGTTCAGACCAGAACTGAAAATTCCCGCGGCCTCTGGCAACCATTCACTGCTCTTCTCGGTGACAATCCCAGTGTTGATGTCAAGAAGAGCGTTATTGTCACCATTTCTTCAGACAAAGGTCTTTGTGGTGGAATCAATTCCACCTCTGTCAAGATAAGCAGGGTTCTGCACAAATTGAATTCTGAGAAGGCTAAGGCTCAATTGGTGCGTGACTCAAAGAAAAGCATTGTGCTCTGCCTGACTGAATTGCAGAAAAATGCCCTGAATTACACTCAGGTGTCTGTCTTGGCAGATGACATTCTAAAGAATGTGGAGTATGATGCATTAAGGATTGTTTTCAACAAATTTCATTCTGTTGTACAATTTATGCCGACAGTGTCAACTATACTGTCTCCTGAGGTTATTGAGAAAGAGGCTGAAGCAGGAGGAAAGCTTGGGGAACTGGATTCATATGAGATTGAAGGTGGCGAGACAAAAGCTGAAATTCTTCAGAATCTGTCTGAGTTCCAGTTTTCATGTGTCATGTACAATGCTGTGTTGGAGAATGCTTGTAGTGAGCAAGGAGCAAGAATGTCTGCAATGGACAGTTCTAGCAGGAACGCTGGGGAGATGCTTGATCGTCTCACTCTCACCTATAACAGAACTCGTCAAGCATCAATTACCACTGAATTGATAGAGATTATCTCTGGAGCTTCAGCACTGGAAGGTTAA 921 0.4571 MAMAAALRREGRRLTQPINALNSSLISQDQAPHGTRSISTQIVRNRMKSVRNIQKITKAMKMVAASKLRAVQTRTENSRGLWQPFTALLGDNPSVDVKKSVIVTISSDKGLCGGINSTSVKISRVLHKLNSEKAKAQLVRDSKKSIVLCLTELQKNALNYTQVSVLADDILKNVEYDALRIVFNKFHSVVQFMPTVSTILSPEVIEKEAEAGGKLGELDSYEIEGGETKAEILQNLSEFQFSCVMYNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1122 306 PANTHER ATP SYNTHASE GAMMA CHAIN 1 305 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aed10g1122 306 Pfam ATP synthase 41 304 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aed10g1122 306 CDD F1-ATPase_gamma 39 301 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aed10g1122 306 PRINTS ATP synthase gamma subunit signature 282 303 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aed10g1122 306 PRINTS ATP synthase gamma subunit signature 97 116 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aed10g1122 306 PRINTS ATP synthase gamma subunit signature 251 270 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aed10g1122 306 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 39 304 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aed10g1122 306 Gene3D ATP synthase, gamma subunit, helix hairpin domain 43 301 - -
Aed10g1122 306 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 41 304 IPR035968 GO:0015986|GO:0045261|GO:0046933
Aed10g1122 306 PIRSF ATP_synthase_gamma 6 304 - -
Aed10g1122 306 ProSitePatterns ATP synthase gamma subunit signature. 290 303 IPR023632 -
Aed10g1122 306 Gene3D - 63 263 - -
Aed10g1122 306 PANTHER BNAA05G10580D PROTEIN 1 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1122 Aed-Chr10 10349659 10356639 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1122 17 304 Primary Pumps ATPases AT1G15700 29.107 2.63e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1122 K02136 - gmx:100813657 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1122 10 10349659 10356639 Aed10g1122 10 10349659 10356639 ECH