Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1093 ATGCTGATGCTCATCAAAATTCAGAGTTGGCTGCGGAAGCCAGAGGTATGGAGATTTGTCTGTTTCTTTTCATCTGTTATTGCACTTCTCTGTTATGCTTTGAGCTCTGCTTTCAATTATCTATTTGGAAATTGGACATGGTGGAAGTTATTAGTTTATGTTGTTCTTAGTTTCGATGTCTGTCTTGCACTCTTGTTTGCAAAGGCAGGGGAGCGCGCTGCCTCTCCCCGGCTGGGAGCTAACATGACCTTTATTGTTTTGATGATGACTTCTTTGTACTCTTTTTTCTTCGATAAAGAAGCAAAAGGGAAAGCTGATGCATATAGCCTTGTTTCTAGCGCTGCATTTGCTATCATGTCTCTAGGCTTGGAAAAACTTACTCACTTTGGATTTGAAGTTGATCTTCTATACTTTTTCTGCGGAATTCTAATACTACAGCTCTTGAAAATAAAGTATTGGTTAGTACTTGTGGGAGGGTGTTTCAGTTATTCCCTCATCATTCTCCGTTACACTTTGGATGCTCCAACAAGAACTGGGCTTCATGAAATCCAAGGCCGAGATCATGTAGTAATTGAACTTGGTTCGCATTCACAATCACAAGGAACCCGAGCCAGTCCAAGTGCTATTCATTCATCCCAACATTCACAGACACAAGAAACCAGCGCCAGTCGCAGCACTACTCAAGTGGATTCAGCCCATGATCTTGATCCTTCTTCAGAAAACGAGGACGTGCGGTTCGTAGTCACTCAATCACAACAAGGCAATATTGATAGTGATGATAACAACAGTATTGTGGCACAGTTTATGGGTTGCATAGAGAAACTTAGGAAGGAGAGTGAGAACATTAAGGACACGATTTCCAAGCATGTAAACAAATACCTTGTTAAAAATGTCGATCGGGATTCGGTAGTGCTGCTAAGTCGAAAATGGAAGTTGTACCGCGATAGCAACTTGGTGGTGGATTCGTTGGGAATTCGCGATGACAACTTGGTGGTGGATTCGTTGCCTTTGGGAATTATCAACGACCTTCGTGACAGCGCGAGGCTCTTGGTGACAGCAGGGTTAAAAGAGAAATGCTTACACGTGTACAATACTTGCCGGAAGGAGTTTCTGCGTGAGATTCTATCAATAATTGAGTTGAAAGAGATCGATGAGGAGGAGGACATAGACGAGGTTACGAAGAAGATACGGTATTGGATCAACGTTTGGTATGTAGCACATAAGATACTATTACCCAATGAAGGCAGACTCTTTGAACGCATTTTTGAAGGCTCCGTTCAACTTGAGGATGAGTACCCTGCATTACACGCCGGATTAGACAAGAGTTTTGGCATTTGGGAGGACTTGTTAAATCTTACATATGGTGTTAAGGAGCAAGCCATTGTTTCAGGTGGCAGGCTTCATCAGATTACCCTTGATGTGTTGCACTACTCTGAACTGATATGTCGGGATTGGTACCCTCTTTTCATGTTGGATGAGGGAATGCTTACATTTGATGGCCACATAGTCGGGATAGCAACCCTGTTAGACAGCAAATTGGAAGCAATCTCCAAAAATTACAATGACCCTACTCTGGGTTATCTTTTCATCATCAACAATCGGGCCTTCATAGAGCAGCTCAAGTGCAAAACGGAATCATTTAGGTCGTATTTTTTATTATGA 1662 0.4242 MLMLIKIQSWLRKPEVWRFVCFFSSVIALLCYALSSAFNYLFGNWTWWKLLVYVVLSFDVCLALLFAKAGERAASPRLGANMTFIVLMMTSLYSFFFDKEAKGKADAYSLVSSAAFAIMSLGLEKLTHFGFEVDLLYFFCGILILQLLKIKYWLVLVGGCFSYSLIILRYTLDAPTRTGLHEIQGRDHVVIELGSHSQSQGTRASPSAIHSSQHSQTQETSASRSTTQVDSAHDLDPSSENEDVRFVVTQSQQGNIDSDDNNSIVAQFMGCIEKLRKESENIKDTISKHVNKYLVKNVDRDSVVLLSRKWKLYRDSNLVVDSLGIRDDNLVVDSLPLGIINDLRDSARLLVTAGLKEKCLHVYNTCRKEFLREILSIIELKEIDEEEDIDEVTKKIRYWINVWYVAHKILLPNEGRLFERIFEGSVQLEDEYPALHAGLDKSFGIWEDLLNLTYGVKEQAIVSGGRLHQITLDVLHYSELICRDWYPLFMLDEGMLTFDGHIVGIATLLDSKLEAISKNYNDPTLGYLFIINNRAFIEQLKCKTESFRSYFLL 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1093 553 Coils Coil 272 292 - -
Aed10g1093 553 Pfam Exo70 exocyst complex subunit 459 541 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aed10g1093 553 SUPERFAMILY Cullin repeat-like 265 539 IPR016159 -
Aed10g1093 553 PANTHER PROTEIN, PUTATIVE-RELATED 8 546 - -
Aed10g1093 553 Gene3D Exocyst complex component Exo70 245 436 - -
Aed10g1093 553 Gene3D Exocyst complex component Exo70 437 549 - -
Aed10g1093 553 PANTHER EXOCYST COMPLEX PROTEIN EXO70 8 546 IPR004140 GO:0000145|GO:0006887
Aed10g1093 553 MobiDBLite consensus disorder prediction 198 234 - -
Aed10g1093 553 MobiDBLite consensus disorder prediction 198 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1093 Aed-Chr10 9975767 9977428 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1093 327 539 EXO70 exocyst subunit family AT5G58430 29.167 3.24e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1093 - - gmx:100795016 541.576