Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1075 ATGGCTCTCTTCCGCAGGTTCTTTTACAGGAAGCCACCGGATCACCTCCTCGAGATCTCCGACAGACTCTATGTTTTTGATTGTTGCTTCTCTAAGAATGTGCTGGAGGAAGAGGAGTACAAGGTTTATATTGGGGGGGTTGTGGCTCAGCTACAGGATCACTATCCAGACGCTTCTTTCATGGTGTTCAATTTCAGAGAAGGGGATAGGCGCAGCCGAATTTCAGACATCATGTCTCAGTATGAGATGACAGTTATGGAGTACCCTCGGCAATATGAGGGTTGTCCACTTCTGCCTTTGGAGATGATTCACCACTTCCTCCGGTCAAGCGAGAGTTGGCTGTCGTTGGAAGGGCAACAAAACGTGCTTCTGATGCACTGTGAAAGGGGTGGTTGGCCTGTGCTGGCATTTATGCTAGCTGGTCTGCTATTGTACAGGAAACAATACAGTGGGGAACACAAGACTCTTGAAATGGTGTACAAGCAAGCCCCTAGAGAACTTCTCCACCTTTTATCTCCTTTGAATCCACAACCTTCTCATTTGAGATATCTTCAATACATTTCCAGGAGGCATTTGGGTTCTGTGTGGCCTCCACCAGATACACCCTTATATTTGGATTGCCTCATTCTTAGAGTCCTTCCATTATTTGATGGCGGAAAAGGTTGCAGACCGGTTGTGCGTGTCTATGGTCCAGACCCTTCAAAACCTGCCAACAGAAGTTCCAAGCTTCTTTTCTCAACCTCAACGATCCAAAATCATGCTCGTCACTACCTTCAGGCAGAATGTATGCTCGTGAAAATTGACATCCATTGTCATGTTCAAGGAGATGTGGTTCTTGAATGCATACATTTAAGTGAAGATTTTGTTCGTGAGGAGATGGTGTTTAGAGCCATGTTTCATACTGCGTTTGTACGGTCAAATATACTTACGCTGAGCCGTGATGAAATTGATATTCTGTGGGATGCAAAGGATCAGTTCCCCAAGGACTTCAAATTTGAGGTGCTTTTTTTGGATGCTGATTCTGTTCGACCTAATCTAACCACATTCAATGTGAGTGGAGATGCAAATGACACAGAATGTGCTTCACCTGAGGCTGAGGAATTCTATGAAGCAGAAGAGATCTTCAGCAATGTAATTGATGCACAAGAAGGTAAGGGGGATTACGATTCTCCAATGGTTCTTGATGATGGAAGTCATAAAGAGCTTTGGAAAGAGTATTCAGATCCTCATACTTTTCAGGATTCCATGTTAGTTGATGATGTGAGGTACAAGCTTGATGAGAGGATGGCTTCAGATACTCATGCTGTGAAAGATATTGGTGTGGATTATGGAGTCACTTTTATGACAAAGGAAGTCAGTGTGGATGTGCATGATGAGTTGGCAGTTATGGCTATGCAAACCAAATATGATGAAGATAACAATGAAACAGAAAACGTGTTAGAGTCTGAGGAAGGGCAGCAGGTGCTTGAACTTCGTTCTGCTGATAAGAAGCAACTTCCTTCAAACTCAAAGCAAGTGGGAGATACAGTTTTAGCAAAGCAAAAGACTAAACAACAAGAACCACTTGGTTTTCAGGCAAAACAAGCAAAAGCCAATGCAACAACTAGGTGGATTCCTTCTAATAAGGGTTCTTATCAAGATTCAATGCATGTCTCATATCCACCATCAAGGAATAATAATTCACCAGCTCTTCTGTCAGATGTTATCTCTGCAAAGGAGAAAATTACTGATGCCAAAGGAAAAGCTATTTCTGGTCCTCATGTCTCTGAAGTAATTGTTTCTATGGACATGAGAAATGACCTGAAAAGCTGTAAATGGGATAATTCAAAATCTTCAGACAGCATAGCTGAAATAGACTCTAACTCTCCATCACCATCATTACTGTCAGTCAAAGAGACATCTCTTCAGTCAGCTACTCAAACACCACAACAGAGCTACGATCAAATGTTACCACTTCATCCACCTCCACCTCCTCCTCCACCTCCATTATTTGGGCAAAATAGAGGGAGCTTCATAACTCCTTCTACCCATTGGAAATCTGTTTCTTCATCCATTCCCGTAGTTGGACAAAATAATAGTGCTTTACCTCCTTCCATTGCAAGTGGTTCAGTTATATCAAAAGTTTCTGAATTAATTGATGCAGTTTCCCTTCCCTGTCCTCCACCATCACTACCACCGCCGCCGCCGCCGCCACCACCACCTCCTCCCTCAATATCTCCAACATCATTTAAAGCTCCACCTCCTGGACCCCCTCCGCCACATCCACCTTCATCTCCTTTATGTAAATCTACACCACTGCCTCCTCCTCCTTTAAGTACTGCTCCACCACCACCTCCTCCTCCTTCTTTATGTAGAGCTCCACCTCCACCTCCACCACCACCTCTTCTTCCATCAAGTGCAACACCACCTCCTTCATTGTCTAGAACCCCACCTCCCCCGCCTCCTCCAACTCGTGGACCACCACCACCTCCAATGCATGGAGGCACACCTCCTCCACCACCTCCAAGTGGTCGAGGCCTACCTCCTACTGGATCTCGGGCTCTTGGTGCTCCTGCTTCTTTTGGACATCTAGGTGGGGCTCCTTCTCCTTCACCACCTGGAATTGATCCAAGAGGGAGAGGGCGTGGACTTGCACGTACTACGGGAGCTGGTGCTATGGCAGCTCGGCGGTCCTCCTTAAAGCCTCTGCATTGGAGTAAGGTAACAAGAGCATTGCAAGGAAGTTTATGGGACGAATTACAAAGACGTGGAGATCCCCAAATAACACATGAGTTCGACGTTTCAGAGATAGAGAAGCTTTTTTCTGCAAATGTTCCAAAACTTGCTGATTCAGATGGTAAATCTGGTGGGCGACGCAAATCTGTTGGATCCAAAACTGACAAAATCCACTTGATTGACCTAAGGAGGGCCAATAATACTGAAATTATGCTCACAAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTACTGGCTATGGATGATTTAGTGTTAGATGTTGATCAGGTCGAAAATCTCATTAAATTTTGTCCTACCAAAGAGGAGATAGAGCTTTTAAAGGGATACACTGGTGATAAGGAGAATTTGGGGAAGTGTGAAAAGTATTTTTTGGAGCTGATGAAAGTGCCAAGAGTGGAGTCAAAACTCAGAGTATTCTCTTTCAAGATTCAGTTTGGGACCCAGATTACAGAGTTTAAGAAGAGTTTAAACACAGTGAACTCTGCCTGTGAAGAGGTTCGAAACTCATTCAAACTGAAGGAGATTATGAAGAAAATTCTTTATTTGGGTAATACATTGAATCAAGGAACAGCAAGGGGATCTGCTGTTGGATTCAAGTTAGATAGTCTCTTAAAACTAACCGAGACTCGAGCTTCAAACAGTAAAATGACACTCATGCATTTTCTTTGCAAGGTCCTAGCTGATAGGTTTCCCGGACTCCTTGATTTTCACCTTGACCTTGTTAGCTTGGAAGCGGCCACTAAGATACAATTGAAATCATTAGCAGAAGAAATGCAGGCAATCATCAGGGGATTAGAAAAGGTTAAACAGGAGCATGCTGCATCTAAAAATGATGGCCCTGTGTCTGAAGTTTTTCGTAAGACATTGAAGGAATTCACTGCTGTTGCAGAGTCAGAGGTGACATCTGTAACAAACCTATATTCTGTGGTGGGTAGAAATGCAGATGCACTTGCCCTATATTTTGGTGAGGATCCTGCCCGTTGTCCTTTTGAGCAAGTTACTACAACTCTCTTAAATTTTACAAGGTTGTTTCTGAAAGCACATGAAGAGAATTCCAAACAAGCAGAGTTAGAGAAAAAGAAAGCAGAAAAAGAGGCTGATATGGAGAAGGCTAAAGGAATTAACTTGATAAGGAAGGGTGGAAAATATGAAGAGAGAGAAGAAGAAGAAAGCTGA 3918 0.4364 MALFRRFFYRKPPDHLLEISDRLYVFDCCFSKNVLEEEEYKVYIGGVVAQLQDHYPDASFMVFNFREGDRRSRISDIMSQYEMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEHKTLEMVYKQAPRELLHLLSPLNPQPSHLRYLQYISRRHLGSVWPPPDTPLYLDCLILRVLPLFDGGKGCRPVVRVYGPDPSKPANRSSKLLFSTSTIQNHARHYLQAECMLVKIDIHCHVQGDVVLECIHLSEDFVREEMVFRAMFHTAFVRSNILTLSRDEIDILWDAKDQFPKDFKFEVLFLDADSVRPNLTTFNVSGDANDTECASPEAEEFYEAEEIFSNVIDAQEGKGDYDSPMVLDDGSHKELWKEYSDPHTFQDSMLVDDVRYKLDERMASDTHAVKDIGVDYGVTFMTKEVSVDVHDELAVMAMQTKYDEDNNETENVLESEEGQQVLELRSADKKQLPSNSKQVGDTVLAKQKTKQQEPLGFQAKQAKANATTRWIPSNKGSYQDSMHVSYPPSRNNNSPALLSDVISAKEKITDAKGKAISGPHVSEVIVSMDMRNDLKSCKWDNSKSSDSIAEIDSNSPSPSLLSVKETSLQSATQTPQQSYDQMLPLHPPPPPPPPPLFGQNRGSFITPSTHWKSVSSSIPVVGQNNSALPPSIASGSVISKVSELIDAVSLPCPPPSLPPPPPPPPPPPPSISPTSFKAPPPGPPPPHPPSSPLCKSTPLPPPPLSTAPPPPPPPSLCRAPPPPPPPPLLPSSATPPPSLSRTPPPPPPPTRGPPPPPMHGGTPPPPPPSGRGLPPTGSRALGAPASFGHLGGAPSPSPPGIDPRGRGRGLARTTGAGAMAARRSSLKPLHWSKVTRALQGSLWDELQRRGDPQITHEFDVSEIEKLFSANVPKLADSDGKSGGRRKSVGSKTDKIHLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDDLVLDVDQVENLIKFCPTKEEIELLKGYTGDKENLGKCEKYFLELMKVPRVESKLRVFSFKIQFGTQITEFKKSLNTVNSACEEVRNSFKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTETRASNSKMTLMHFLCKVLADRFPGLLDFHLDLVSLEAATKIQLKSLAEEMQAIIRGLEKVKQEHAASKNDGPVSEVFRKTLKEFTAVAESEVTSVTNLYSVVGRNADALALYFGEDPARCPFEQVTTTLLNFTRLFLKAHEENSKQAELEKKKAEKEADMEKAKGINLIRKGGKYEEREEEES 1305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1075 1305 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Aed10g1075 1305 SMART it6_source 883 1302 IPR015425 -
Aed10g1075 1305 ProSiteProfiles Formin homology-2 (FH2) domain profile. 883 1284 IPR015425 -
Aed10g1075 1305 MobiDBLite consensus disorder prediction 604 677 - -
Aed10g1075 1305 MobiDBLite consensus disorder prediction 715 891 - -
Aed10g1075 1305 SMART PTEN_C2_2 198 338 IPR014020 -
Aed10g1075 1305 Gene3D Protein tyrosine phosphatase superfamily 13 201 IPR029021 -
Aed10g1075 1305 Pfam Formin Homology 2 Domain 890 1258 IPR015425 -
Aed10g1075 1305 Coils Coil 1259 1288 - -
Aed10g1075 1305 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Aed10g1075 1305 Coils Coil 1165 1185 - -
Aed10g1075 1305 MobiDBLite consensus disorder prediction 608 648 - -
Aed10g1075 1305 CDD PTP_PTEN-like 16 190 - -
Aed10g1075 1305 Gene3D Formin, FH2 domain 884 1270 IPR042201 -
Aed10g1075 1305 MobiDBLite consensus disorder prediction 649 665 - -
Aed10g1075 1305 PANTHER FORMIN-J 1 1287 - -
Aed10g1075 1305 MobiDBLite consensus disorder prediction 1264 1305 - -
Aed10g1075 1305 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 188 IPR029021 -
Aed10g1075 1305 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Aed10g1075 1305 MobiDBLite consensus disorder prediction 539 560 - -
Aed10g1075 1305 MobiDBLite consensus disorder prediction 718 840 - -
Aed10g1075 1305 SUPERFAMILY Formin homology 2 domain (FH2 domain) 960 1286 - -
Aed10g1075 1305 Gene3D - 203 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1075 Aed-Chr10 9663854 9673434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1075 1 638 FH2 protein (formin) Gene Family AT5G07740 56.204 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1075 - - gmx:100779085 1202.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1075 10 9663854 9673434 Aed10g1075 10 9663854 9673434 ECH