Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1069 ATGTACTCTTCTGATTATGTGTTTCCTACAGGACTTCAGTTTGAGAATCGTTGTGAAGTTGGAGTCTTCTCAAAACTTACAAATGCCTATTGTTTGGTTACCATTGGAGGTTCAGAAAACTTCTACAGTTCATTTGAGGCTAACTTAGCAGATGTTATCCCTGTGATCAAGACCTCCATCAGTGGCATTCGTACTGTTGGTCGTCTTTGTGTTGGAAACAAGAATGGGCTTCTCTTGCCCCATACCACCACAGACCAAGGGGAAAAAACATTTAGAGTCTTGACAAAGATTGATCTTATGGACAAGGGTACTGATGCTGTTGAAATGTTGGAGGGGAGAGCTTATAGATTAAAGTATCCATGGATTGGTGTTGTCAATAGATCACAAATTGATATTAACAAGAATGTTGACATGAATGCCACTAGAAAAGCTGGCAAAGGCCATTGA 447 0.4004 MYSSDYVFPTGLQFENRCEVGVFSKLTNAYCLVTIGGSENFYSSFEANLADVIPVIKTSISGIRTVGRLCVGNKNGLLLPHTTTDQGEKTFRVLTKIDLMDKGTDAVEMLEGRAYRLKYPWIGVVNRSQIDINKNVDMNATRKAGKGH 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1069 148 Pfam Dynamin central region 105 143 IPR000375 -
Aed10g1069 148 Gene3D - 7 107 - -
Aed10g1069 148 SMART eIF6neu2 10 137 IPR002769 GO:0042256|GO:0043022
Aed10g1069 148 PRINTS Dynamin signature 108 127 IPR022812 -
Aed10g1069 148 PRINTS Dynamin signature 85 101 IPR022812 -
Aed10g1069 148 SUPERFAMILY Pentein 12 94 - -
Aed10g1069 148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 141 IPR027417 -
Aed10g1069 148 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 10 89 - -
Aed10g1069 148 Pfam eIF-6 family 12 96 IPR002769 GO:0042256|GO:0043022
Aed10g1069 148 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 10 89 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1069 Aed-Chr10 9588935 9592509 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1069 8 92 Eukaryotic Initiation Factors Gene Family AT3G55620 75.294 4.81e-43 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1069 K03264 - gmx:100306262 139.428