Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1068 ATGAGGGGTGGGAGGAGGGGTATGATAAAGCTTAAGTTTAGCAAGATCTACTCTTTTGCTTGTGGTAAAACAATCTTCAAGAGAGAACATTCAAGGATTGGGGGGCATGGTCATTCCAGGGTGGTTTTCTGCAATGAACCAGATAGATTTGAGGGAGGGGTTTCCAGTTATGCTGATAACTCTGTTAGGTCCACAAAATACACTGTTGTCACTTTCTTGCCTAAGTCACTGTTTGAGCAGTTTAGGAGGGTGGCTAATTTCTATTTCTTGGTGGCTGGCATCTTGGCCTTCACAAAGCTTACTCCTTATACTGCTGTCAGTGCTATTCTTCCTCTGTCTATCATCATTGGGGCAACTATGGTGAAAGAGGGTATTGAAGATTGGCGCAGGAAAAAGCAGGATATTGAGGTGAACAATAGAAGAGTTATATTGCATAAAGGTGATGGCATTTTCGAATATACCGAATGGAAGAATCTGAGAGTAGGGAATATAGTGAAGATAATGAAGGATGAATTCTTCCCTGCTGACCTCCTACTGCTTTCCTCCAGTTATGAGGATGCAGTCTGCTATGTTGAGACCATGAACTTGGATGGTGAGACAAATTTGAAGTTAAAACAAGGGCTGGATGTAACTTCTTCCTTACAGGAGGACTTTAAATTCCGTGATTTTAGAGCTGTCATCAAATGTGAAGACCCAAATGCAAATTTGTATTCATTTGTTGGGAGCATGGAGTTTGGAGAGCAAAAATATCCTCTTTCTGCTCAGCAACTTCTTCTGAGAGACTCTAAACTTCGTAATACAGACTACGTGTTTGGAGCTATCATCTTTACTGGTCATGATACAAAGGTTATTCAAAACTCCACTGATCCCCCTTCAAAAAGAAGCAAAATTGAGAAAAAGATGGATAAGATTATCTACTTCTTGTTTTGTGTGTTATTTCTAATTGCATTTGTTGGATCTATTCTCTTTGGCATTACTACCAAAGGTGACCTCAACAATGGGTTAATGAAAAGATGGTATCTAAGACCAGATAGTGCCACAATTTTCTTTGATCCAAAAAGAGCAGCTGCAGCTGCTATATTTCATTCTTTAACAGCCTTGATGTTATACAACTTCTTCATTCCTATCTCCTTGTATTTCTCAATAGAGATTGTCAAAGTCCTTCAGAGCATCTTCATCAATCAAGATATCCACATGTACTATGAAGAAGCTGACAAACCAGCTCTTGCCCGTACTTCAAACTTGAATGAGGAACTTGGCCAAGTTGACACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAACTCAATGGAGTTCATCAAATGTTCTATTGCTGGGGTAGCTTATGGCCGTGGTGTGACAGAGGTTGAGCAAGCCATGGGTAGAAGTAATGGTTCACCTATTTATCATGAGCATATTAATGGATTACAATCAAAATCAAATGAAATCCGGGACTCTCCTGATAGAAAAGAACCTATCAAAGGTTTTAACTTTACAGATGAAAGGATAATGAGTGGAAACTGGGTTAGTGAGCCTTATGCAGATGTTATACAGAATTTTTTCCGCTTATTGGCAATTTGTCACACTGCCATACCAGAAGTGGATGAAGAAACAGGAAATGTCTCATATGAGGCTGAATCTCCGGATGAAGCAGCATTTGTGATTGCTGCAAGAGAAGTTGGCTTTAAATTCTACAAAAGGACTCAGACTTGTTTGTCAATATATGAGTTGGATCCAGTTTCTGGCAATGAAGTTGAAAGGACGTACAAGCTTCTTAATGTTTTAGAATTCAATAGCTCGAGAAAGCGAATGTCAGTGATAGTGAAAGATGAAGAAGGGAGAATTTTTCTACTCTGCAAAGGTGCTGACAGTGTCATGTTTGAAAGGCTTGCCAAGAATGGGAGGAAGTTTGAAGAGAAAACTCTGGAACATGTGCGTGAATATGCTGATGCAGGTCTAAGGACCCTAGTACTTGCCTATTGCAAACTTGATGAAGAAGAATACAAGGAGTTTGATGATAAATTTTCTGAAGTAAAAATTTCAGTAGCCGCAGATCGAGAAAGCCTGATTGAAGATGTATCAGATAAGATTGAGAGGAATCTAATCCTTCTGGGTGCCACTGCTGTAGAGGACAAGCTCCAAAATGGGGTTCCTGATTGTATCGACAAGCTTGCCCAAGCTAAGATTAAGATTTGGGTTTTAACTGGGGATAAAATGGAGACTGCCATCAATATTGGAGGAACCTGCCAAACATTTGCTCTGATAATTGATGGAAAATCACTTACTTATGCTCTTGAGGATAATATGAAGAACATGTTTCTAGAGCTAGCAAATCATTGTGCGTCTGTTATCTGCTGCCGCTCATCGCCAAAGCAGAAGGCTCTGGTATTTTTAAGCCTATTCTGCATCCCTCTACTTGACATTTCTTATTTTCATTTTGGTTAA 2448 0.3962 MRGGRRGMIKLKFSKIYSFACGKTIFKREHSRIGGHGHSRVVFCNEPDRFEGGVSSYADNSVRSTKYTVVTFLPKSLFEQFRRVANFYFLVAGILAFTKLTPYTAVSAILPLSIIIGATMVKEGIEDWRRKKQDIEVNNRRVILHKGDGIFEYTEWKNLRVGNIVKIMKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLDVTSSLQEDFKFRDFRAVIKCEDPNANLYSFVGSMEFGEQKYPLSAQQLLLRDSKLRNTDYVFGAIIFTGHDTKVIQNSTDPPSKRSKIEKKMDKIIYFLFCVLFLIAFVGSILFGITTKGDLNNGLMKRWYLRPDSATIFFDPKRAAAAAIFHSLTALMLYNFFIPISLYFSIEIVKVLQSIFINQDIHMYYEEADKPALARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVEQAMGRSNGSPIYHEHINGLQSKSNEIRDSPDRKEPIKGFNFTDERIMSGNWVSEPYADVIQNFFRLLAICHTAIPEVDEETGNVSYEAESPDEAAFVIAAREVGFKFYKRTQTCLSIYELDPVSGNEVERTYKLLNVLEFNSSRKRMSVIVKDEEGRIFLLCKGADSVMFERLAKNGRKFEEKTLEHVREYADAGLRTLVLAYCKLDEEEYKEFDDKFSEVKISVAADRESLIEDVSDKIERNLILLGATAVEDKLQNGVPDCIDKLAQAKIKIWVLTGDKMETAINIGGTCQTFALIIDGKSLTYALEDNMKNMFLELANHCASVICCRSSPKQKALVFLSLFCIPLLDISYFHFG 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1068 815 Gene3D - 480 712 IPR023299 GO:0000166
Aed10g1068 815 Gene3D - 749 801 IPR023214 -
Aed10g1068 815 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 504 673 IPR023299 GO:0000166
Aed10g1068 815 CDD P-type_ATPase_APLT_Dnf-like 59 797 - -
Aed10g1068 815 Gene3D - 113 289 - -
Aed10g1068 815 Pfam Phospholipid-translocating ATPase N-terminal 43 108 IPR032631 -
Aed10g1068 815 SUPERFAMILY HAD-like 414 800 IPR036412 -
Aed10g1068 815 Pfam Cation transport ATPase (P-type) 537 631 - -
Aed10g1068 815 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 749 797 - -
Aed10g1068 815 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 7 751 - -
Aed10g1068 815 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Aed10g1068 815 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 749 797 - -
Aed10g1068 815 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 7 751 - -
Aed10g1068 815 SUPERFAMILY Calcium ATPase, transduction domain A 144 285 IPR008250 -
Aed10g1068 815 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 751 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Aed10g1068 815 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 420 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1068 Aed-Chr10 9569636 9579314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1068 3 797 Primary Pumps ATPases AT1G68710 68.070 0.0 1197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1068 K01530 - gmx:100798329 1434.08