Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1066 ATGGAGTCAGGTGAGGAGATTAATTTGAACATAGAGAGTGGAGGTGGGAAGAGTAGTGGTGATGGGTTCATTGATAGGAGTAAAGTGCGGATTTTGTTGTGCGATAACGATTCCAAGAGTTCTCAAGAGGTTTTTACGCTTCTTTTGAGGTGTTCTTATCAGGTTACCTTGGTAAAGTCGCCAAGACAGGTAATTGATGCACTGAATGCAGAGGGGCAACATATAGATATCATACTGGCTGAACTTGACCTTCCGATGAAGAAGGGCATGAAGATGCTGAAGTACATAGCACGGGATAAAGAGTTTCGCAGAATCCCTGTTATAATGATGTCTGCACAAGATGAGGTATCCATTGTTGTTAAGTGCTTGAGACTTGGAGCAGCAGACTATCTAGTAAAGCCTTTACGCACTAATGAACTATTAAATTTGTGGACGCACATGTGGAGACGGAGGCACATGCTTGGACTTGTAGAGAAGAACATCTTGAATTACGATTTTGATCTGGTAGTATCTGACCATAGTGATGCCAACACAAACAGTACCACCTTGTTCTCTGATGACACAGATGACAAGTCCAAAAGAAGCACTAATCCAGAGGTGGAAATATCAATCCAACAAGAGCAAGAGTCTACTATTGCAATTGCTGCTTCTTTGGAGGAACCTCCAGATGGTTGTGCATCTGAACATGGGCCTGATGTGGATGGAGTTAATGACCACCAAACAGCACATTTTTCATCTGGTCTGAAGAAGAGTGAACTAAGGATCGGGGAGTCATCAGCCTTCTTCACGTATGTTAAAGGGTCAATACTGAAGAGCAACTTTGAAGGGGTTGTTAATGTAGACAACCATGGTGCCACACATGTGAGGATGGAAGTTATGCATCAAGCATGTGCTCAACAAGAGGTTAATGACCTTCAAATATGTGAAAATGGAGAGGCATATGAAAGTCAATCACAAGATGACTTACCCAGCAGCACTAGTATGCCTGATTCTTTCTCTATTGAAAGGTCTTCTACTCCCCCTGCATCAACGGAAGAATCACAGCAAAAGCACTACAAGGAAGAAAATTTACACCAGGGTGTGATGCATCCAAGAAACAGGACTCATGGTTCTGAGCATGAAGTATCTGGCATGGCTTCCCAACATGCTTATCCATATTATATTTCAGGAGGTTTTAATCATGTTATGATGCCTTCATCAGAACAAATGTATCATCAAAAGAATATCCAGGACCTACAGAATCATCCTAATACAGTTATGATAGCACAGTACAGTCATCTTCCCCAAGGTGGTCCTCATGGAATGGGGATGCCGTCCTTCCCATACTACCCAATGAGTATATGCTTACAACCTGGTCAGGTTCCTACACCTCATTCATGGCCATCATTTGGAAGTGCAAGTTCATCAGAAGCAAATGTAAGTAAAGTTGATAGGAGAGAAGCAGCACTGATGAAGTTCAGACAGAAAAGGAAAGAGCGCTGCTTTGATAAGAAAATTAGGTATGTTAACCGGAAACGACTTGCTGAAAGACGGCCTCGTGTGAGGGGACAGTTTGTCAGAAAGTTGAACAGTGCTAATGTGGATCTTAACGGGCAGCCTGCATCAATGGACTACGATGAAGATGACGAAGAGGATGAAGATGACCAGGGAGGAAGAGATTCTTCTCCTGAGGATGCTTGA 1680 0.4286 MESGEEINLNIESGGGKSSGDGFIDRSKVRILLCDNDSKSSQEVFTLLLRCSYQVTLVKSPRQVIDALNAEGQHIDIILAELDLPMKKGMKMLKYIARDKEFRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRHMLGLVEKNILNYDFDLVVSDHSDANTNSTTLFSDDTDDKSKRSTNPEVEISIQQEQESTIAIAASLEEPPDGCASEHGPDVDGVNDHQTAHFSSGLKKSELRIGESSAFFTYVKGSILKSNFEGVVNVDNHGATHVRMEVMHQACAQQEVNDLQICENGEAYESQSQDDLPSSTSMPDSFSIERSSTPPASTEESQQKHYKEENLHQGVMHPRNRTHGSEHEVSGMASQHAYPYYISGGFNHVMMPSSEQMYHQKNIQDLQNHPNTVMIAQYSHLPQGGPHGMGMPSFPYYPMSICLQPGQVPTPHSWPSFGSASSSEANVSKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNSANVDLNGQPASMDYDEDDEEDEDDQGGRDSSPEDA 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1066 559 MobiDBLite consensus disorder prediction 313 346 - -
Aed10g1066 559 ProSiteProfiles Response regulatory domain profile. 30 148 IPR001789 GO:0000160
Aed10g1066 559 MobiDBLite consensus disorder prediction 535 559 - -
Aed10g1066 559 PANTHER RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 5 542 - -
Aed10g1066 559 MobiDBLite consensus disorder prediction 524 559 - -
Aed10g1066 559 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 542 IPR045279 GO:0009736
Aed10g1066 559 ProSiteProfiles CCT domain profile. 479 521 IPR010402 GO:0005515
Aed10g1066 559 Gene3D - 29 226 - -
Aed10g1066 559 MobiDBLite consensus disorder prediction 313 372 - -
Aed10g1066 559 Pfam Response regulator receiver domain 31 142 IPR001789 GO:0000160
Aed10g1066 559 SMART REC_2 29 144 IPR001789 GO:0000160
Aed10g1066 559 MobiDBLite consensus disorder prediction 220 239 - -
Aed10g1066 559 MobiDBLite consensus disorder prediction 347 372 - -
Aed10g1066 559 Pfam CCT motif 479 521 IPR010402 GO:0005515
Aed10g1066 559 MobiDBLite consensus disorder prediction 179 206 - -
Aed10g1066 559 SUPERFAMILY CheY-like 27 154 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1066 Aed-Chr10 9556713 9563039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1066 7 558 Response Regulator Gene Family AT5G61380 48.830 6.33e-178 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Aed10g1066 Response_reg 5.7e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1066 K12127 - gmx:100799728 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1066 10 9556713 9563039 Aed10g1066 10 9556713 9563039 ECH