Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1061 ATGTCTTCCATGATTTTCACCCATCTTTCTCTCTCACTTTCTGTGGACTTTTCTGTGAATGAGTGGGTGATATGCAGGGTGTTTAAGAAGAGTTCAGGTGTGAAGAAGGCTCATAGTGTTTCTGGGATGATGATGTTGGACTCTTATGGAAACCAATTGTTGGGTTCTTCTGCTTATTTGCCACCTCTCACTGATTCATCACCTTCTTCCATTGGCAACACCACAAGCAACATCATGAATGTGACTACTGAATCATCCACTTACGTGCCCTGCTTCTCCAATTTTCCAATTGATCATGTTCCTAGAGGGATCTTTGATTCCGTGAGCAACATCAACCACAACAACAACAACAACCTCTATGGTGTTTCTTCAAACCATTCTTCATTTTACTCCTCTCAACTTCAGGTTCCACCAACTTTGCCATTGCCTAGTTCTTCACACCATTACCTTAGAGCCTTCCTTGAGAACAGTGGTGGAAATGGATCAAACATGAGGAATGGTTTTGAAGCAGAGAGGGAGCAGGAAACAGGTGTTTCCACTGATGTGACAAATCTTCAAATGGGTAGAAGGCACCTTGTGAATCTTCAAAACAACCCAATTGATTCAGTTGCTGCAGTTGCACCAGTAGTGGACCTTGCTACCTTGTGGAACTACTGA 657 0.4292 MSSMIFTHLSLSLSVDFSVNEWVICRVFKKSSGVKKAHSVSGMMMLDSYGNQLLGSSAYLPPLTDSSPSSIGNTTSNIMNVTTESSTYVPCFSNFPIDHVPRGIFDSVSNINHNNNNNLYGVSSNHSSFYSSQLQVPPTLPLPSSSHHYLRAFLENSGGNGSNMRNGFEAEREQETGVSTDVTNLQMGRRHLVNLQNNPIDSVAAVAPVVDLATLWNY 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1061 218 PANTHER NAC DOMAIN-CONTAINING PROTEIN 100 17 191 - -
Aed10g1061 218 MobiDBLite consensus disorder prediction 158 177 - -
Aed10g1061 218 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1061 Aed-Chr10 9434519 9436454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1061 20 218 NAC Transcription Factor Family AT5G61430 31.963 3.23e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1061 - - gmx:547650 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1061 10 9434519 9436454 Aed6g1586 6 19874034 19876070 ECH
Aed10g1061 10 9434519 9436454 Aed10g1061 10 9434519 9436454 ECH